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Aliases for LOC105376428 Gene

Subcategory (RNA class) for LOC105376428 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105376428 Gene

  • Uncharacterized LOC105376428 3

External Ids for LOC105376428 Gene

Previous GeneCards Identifiers for LOC105376428 Gene

  • GC10U902186

Summaries for LOC105376428 Gene

GeneCards Summary for LOC105376428 Gene

LOC105376428 (Uncharacterized LOC105376428) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376428 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105376428 Gene

Genomics for LOC105376428 Gene

Regulatory Elements for LOC105376428 Gene

Enhancers for LOC105376428 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10H014651 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -0.8 -810 5 PKNOX1 SIN3A FEZF1 BRCA1 ZNF2 GLIS2 ATF7 JUNB MAFF RFX3 FAM107B CDNF HSPA14 LOC105376428 LOC105376429
GH10H014657 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +4.2 4216 4 HDGF BMI1 BATF RAD21 ZNF143 ATF7 FOS ETV6 RUNX3 CREM C10orf111 DCLRE1C LOC105376428 GC10M014663
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105376428 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105376428 Gene

Chromosome:
10
Start:
14,655,127 bp from pter
End:
14,660,616 bp from pter
Size:
5,490 bases
Orientation:
Plus strand

Genomic View for LOC105376428 Gene

Genes around LOC105376428 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376428 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376428 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376428 Gene

Proteins for LOC105376428 Gene

Post-translational modifications for LOC105376428 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376428 Gene

Domains & Families for LOC105376428 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105376428 Gene

Function for LOC105376428 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376428 Gene

Localization for LOC105376428 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376428 Gene

Pathways & Interactions for LOC105376428 Gene

SuperPathways for LOC105376428 Gene

No Data Available

Interacting Proteins for LOC105376428 Gene

Gene Ontology (GO) - Biological Process for LOC105376428 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376428 Gene

Drugs & Compounds for LOC105376428 Gene

No Compound Related Data Available

Transcripts for LOC105376428 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376428 Gene

No ASD Table

Relevant External Links for LOC105376428 Gene

GeneLoc Exon Structure for
LOC105376428

No data available for mRNA/cDNA for LOC105376428 Gene

Expression for LOC105376428 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376428 Gene

Orthologs for LOC105376428 Gene

No data available for Orthologs and Evolution for LOC105376428 Gene

Paralogs for LOC105376428 Gene

No data available for Paralogs for LOC105376428 Gene

Variants for LOC105376428 Gene

Sequence variations from dbSNP and Humsavar for LOC105376428 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000301787 -- 14,653,728(+) TCTTA(C/T)ACACA intron-variant, upstream-variant-2KB
rs1000310497 -- 14,660,306(+) AGCAA(C/T)GCATG intron-variant, nc-transcript-variant
rs1000671244 -- 14,658,846(+) CCCTG(C/T)CTTCA intron-variant
rs1000980516 -- 14,655,664(+) TTCAG(G/T)GAGAA intron-variant
rs1001522630 -- 14,659,474(+) CAAAC(A/G)AAAAA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105376428 Gene

Disorders for LOC105376428 Gene

No disorders were found for LOC105376428 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376428 Gene

Publications for LOC105376428 Gene

No publications were found for LOC105376428 Gene.

Products for LOC105376428 Gene

Sources for LOC105376428 Gene

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