Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105376404 Gene

Subcategory (RNA class) for LOC105376404 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105376404 Gene

  • Uncharacterized LOC105376404 3
  • AL136369.1 5

External Ids for LOC105376404 Gene

Previous GeneCards Identifiers for LOC105376404 Gene

  • GC10U902317

Summaries for LOC105376404 Gene

GeneCards Summary for LOC105376404 Gene

LOC105376404 (Uncharacterized LOC105376404) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376404 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105376404 Gene

Genomics for LOC105376404 Gene

GeneHancer (GH) Regulatory Elements for LOC105376404 Gene

Promoters and enhancers for LOC105376404 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I011007 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 -1.5 -1498 13.4 PKNOX1 ZSCAN4 KLF17 MZF1 SIN3A FEZF1 ZNF335 GLIS2 ZNF213 SCRT2 CELF2 GC10P011015 LOC105376404 CELF2-AS2
GH10I011050 Enhancer 0.5 dbSUPER 10.7 -37.7 -37700 1.7 SCRT1 POLR2A BCL6B SCRT2 ZIC2 LOC105376404 CELF2-AS2 CELF2 PIR31867 ENSG00000229206
GH10I011046 Enhancer 0.4 ENCODE dbSUPER 11.1 -34.1 -34063 1.6 LOC105376404 CELF2 CELF2-AS2 PIR31867 ENSG00000229206
GH10I011047 Enhancer 0.3 dbSUPER 10.7 -35.8 -35756 1.1 PRDM6 LOC105376404 CELF2-AS2 PIR31867 ENSG00000229206 CELF2
GH10I011049 Enhancer 0.2 ENCODE 10.7 -36.4 -36388 0.2 LOC105376404 CELF2-AS2 PIR31867 ENSG00000229206 CELF2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105376404 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105376404 Gene

Genomic Locations for LOC105376404 Gene
chr10:11,008,016-11,012,745
(GRCh38/hg38)
Size:
4,730 bases
Orientation:
Minus strand
chr10:11,052,127-11,053,082
(GRCh37/hg19)

Genomic View for LOC105376404 Gene

Genes around LOC105376404 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376404 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376404 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376404 Gene

Proteins for LOC105376404 Gene

Post-translational modifications for LOC105376404 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376404 Gene

Domains & Families for LOC105376404 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105376404 Gene

Function for LOC105376404 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376404 Gene

Localization for LOC105376404 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376404 Gene

Pathways & Interactions for LOC105376404 Gene

SuperPathways for LOC105376404 Gene

No Data Available

Interacting Proteins for LOC105376404 Gene

Gene Ontology (GO) - Biological Process for LOC105376404 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376404 Gene

Drugs & Compounds for LOC105376404 Gene

No Compound Related Data Available

Transcripts for LOC105376404 Gene

mRNA/cDNA for LOC105376404 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376404 Gene

No ASD Table

Relevant External Links for LOC105376404 Gene

GeneLoc Exon Structure for
LOC105376404

Expression for LOC105376404 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376404 Gene

Orthologs for LOC105376404 Gene

Evolution for LOC105376404 Gene

ENSEMBL:
Gene Tree for LOC105376404 (if available)
TreeFam:
Gene Tree for LOC105376404 (if available)

No data available for Orthologs for LOC105376404 Gene

Paralogs for LOC105376404 Gene

No data available for Paralogs for LOC105376404 Gene

Variants for LOC105376404 Gene

Sequence variations from dbSNP and Humsavar for LOC105376404 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000095708 -- 11,011,332(-) G/A intron_variant
rs1000929622 -- 11,009,369(-) G/A/C downstream_transcript_variant
rs1001888517 -- 11,010,871(-) T/C intron_variant
rs1002483083 -- 11,009,622(-) T/G non_coding_transcript_variant
rs1002890146 -- 11,012,736(-) G/A non_coding_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105376404 Gene

Disorders for LOC105376404 Gene

No disorders were found for LOC105376404 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376404 Gene

Publications for LOC105376404 Gene

No publications were found for LOC105376404 Gene.

Products for LOC105376404 Gene

Sources for LOC105376404 Gene

Content
Loading form....