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Aliases for LOC105376222 Gene

Subcategory (RNA class) for LOC105376222 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105376222 Gene

  • Uncharacterized LOC105376222 3
  • AL162727.1 5

External Ids for LOC105376222 Gene

Previous GeneCards Identifiers for LOC105376222 Gene

  • GC09U902361
  • GC09P113723
  • GC09P113725
  • GC09P113727
  • GC09P113738
  • GC09P113868

Summaries for LOC105376222 Gene

GeneCards Summary for LOC105376222 Gene

LOC105376222 (Uncharacterized LOC105376222) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105376222 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105376222 Gene

Genomics for LOC105376222 Gene

Regulatory Elements for LOC105376222 Gene

Enhancers for LOC105376222 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H113609 1.4 Ensembl ENCODE dbSUPER 0.7 -4.5 -4543 2 ELF3 MLX NFIB ARID4B DMAP1 THRB ZSCAN9 RAD21 RARA YY1 C9orf43 PRPF4 CDC26 RGS3 ALAD FKBP15 SLC31A1 LOC105376222 LOC105376221
GH09H113613 1.3 Ensembl ENCODE dbSUPER 0.7 +0.9 890 3 HDGF ZNF133 MAX YBX1 CDC5L ZNF644 RAD21 RELA YY1 ZFHX2 C9orf43 ZFP37 ZNF618 POLE3 ALAD LOC105376222 ENSG00000282897
GH09H113591 1.5 Ensembl ENCODE dbSUPER 0.4 -17.6 -17570 12 HDGF FOXA2 ATF1 ARID4B ZNF2 YY1 SLC30A9 GLIS2 ZNF143 FOS C9orf43 ALAD RGS3 RNF183 LOC105376221 LOC105376222
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105376222 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105376222 Gene

Chromosome:
9
Start:
113,614,957 bp from pter
End:
113,628,746 bp from pter
Size:
13,790 bases
Orientation:
Plus strand

Genomic View for LOC105376222 Gene

Genes around LOC105376222 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105376222 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105376222 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105376222 Gene

Proteins for LOC105376222 Gene

Post-translational modifications for LOC105376222 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105376222 Gene

Domains & Families for LOC105376222 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105376222 Gene

Function for LOC105376222 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105376222 Gene

Localization for LOC105376222 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105376222 Gene

Pathways & Interactions for LOC105376222 Gene

SuperPathways for LOC105376222 Gene

No Data Available

Interacting Proteins for LOC105376222 Gene

Gene Ontology (GO) - Biological Process for LOC105376222 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105376222 Gene

Drugs & Compounds for LOC105376222 Gene

No Compound Related Data Available

Transcripts for LOC105376222 Gene

mRNA/cDNA for LOC105376222 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105376222 Gene

No ASD Table

Relevant External Links for LOC105376222 Gene

GeneLoc Exon Structure for
LOC105376222

Expression for LOC105376222 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105376222 Gene

Orthologs for LOC105376222 Gene

Evolution for LOC105376222 Gene

ENSEMBL:
Gene Tree for LOC105376222 (if available)
TreeFam:
Gene Tree for LOC105376222 (if available)

No data available for Orthologs for LOC105376222 Gene

Paralogs for LOC105376222 Gene

No data available for Paralogs for LOC105376222 Gene

Variants for LOC105376222 Gene

Sequence variations from dbSNP and Humsavar for LOC105376222 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000240096 -- 113,619,282(+) GTGGA(A/G)GGCGC intron-variant
rs1000846977 -- 113,620,762(+) CAAGA(A/G)AGCTG intron-variant
rs1000881674 -- 113,625,666(+) GGAGC(C/T)TCTAA intron-variant, nc-transcript-variant
rs1000941382 -- 113,626,620(+) TTTTT(C/T)CTCTC intron-variant
rs1001108954 -- 113,619,535(+) ATTTT(A/G)CAGTC intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105376222 Gene

Disorders for LOC105376222 Gene

No disorders were found for LOC105376222 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105376222 Gene

Publications for LOC105376222 Gene

No publications were found for LOC105376222 Gene.

Products for LOC105376222 Gene

Sources for LOC105376222 Gene

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