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Aliases for LOC105375614 Gene

Subcategory (RNA class) for LOC105375614 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375614 Gene

  • Uncharacterized LOC105375614 3
  • AC005481.5 5

External Ids for LOC105375614 Gene

Previous GeneCards Identifiers for LOC105375614 Gene

  • GC07U904306

Summaries for LOC105375614 Gene

GeneCards Summary for LOC105375614 Gene

LOC105375614 (Uncharacterized LOC105375614) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375614 Gene

Genomics for LOC105375614 Gene

Regulatory Elements for LOC105375614 Gene

Enhancers for LOC105375614 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G157659 0.7 dbSUPER 12.6 +48.6 48636 6.3 CTCF ZNF146 MAX ZIC2 ZNF507 ZFHX2 ZBTB48 FOS ZSCAN29 TCF7L2 LOC105375614 MIR153-2 PTPRN2 PIR42294 ENSG00000231515
GH07G157576 0.6 ENCODE 11.9 -37.4 -37390 0.2 HDAC6 L3MBTL2 ZBTB11 ELF1 ZBTB40 GABPA MLLT1 CREM LOC105375614 MIR153-2 LOC105375615
GH07G157575 0.4 ENCODE 11.9 -38.0 -38040 0.0 ZNF680 LOC105375614 MIR153-2 LOC105375615
GH07G157586 0.3 FANTOM5 12.6 -27.7 -27685 0.1 LOC105375614 DNAJB6 MIR153-2 LOC105375615
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105375614 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105375614 Gene

Chromosome:
7
Start:
157,614,023 bp from pter
End:
157,618,771 bp from pter
Size:
4,749 bases
Orientation:
Plus strand

Genomic View for LOC105375614 Gene

Genes around LOC105375614 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375614 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375614 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375614 Gene

Proteins for LOC105375614 Gene

Post-translational modifications for LOC105375614 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375614 Gene

Domains & Families for LOC105375614 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375614 Gene

Function for LOC105375614 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375614 Gene

Localization for LOC105375614 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105375614 Gene

Pathways & Interactions for LOC105375614 Gene

SuperPathways for LOC105375614 Gene

No Data Available

Interacting Proteins for LOC105375614 Gene

Gene Ontology (GO) - Biological Process for LOC105375614 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375614 Gene

Drugs & Compounds for LOC105375614 Gene

No Compound Related Data Available

Transcripts for LOC105375614 Gene

mRNA/cDNA for LOC105375614 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375614 Gene

No ASD Table

Relevant External Links for LOC105375614 Gene

GeneLoc Exon Structure for
LOC105375614

Expression for LOC105375614 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375614 Gene

Orthologs for LOC105375614 Gene

Evolution for LOC105375614 Gene

ENSEMBL:
Gene Tree for LOC105375614 (if available)
TreeFam:
Gene Tree for LOC105375614 (if available)

No data available for Orthologs for LOC105375614 Gene

Paralogs for LOC105375614 Gene

No data available for Paralogs for LOC105375614 Gene

Variants for LOC105375614 Gene

Sequence variations from dbSNP and Humsavar for LOC105375614 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000697388 -- 157,615,676(+) CATGT(C/T)TATAA intron-variant, nc-transcript-variant
rs1001367303 -- 157,617,925(+) TGGCA(C/T)CAAAA intron-variant, nc-transcript-variant
rs1001461882 -- 157,613,487(+) CAATC(A/G)ACAGA intron-variant, upstream-variant-2KB
rs1001923117 -- 157,616,563(+) AACCG(A/G)CAGCC intron-variant, nc-transcript-variant
rs1002371639 -- 157,616,808(+) CCAAG(A/G)CAAAA intron-variant, nc-transcript-variant

Variation tolerance for LOC105375614 Gene

Gene Damage Index Score: 2.82; 47.70% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Relevant External Links for LOC105375614 Gene

Disorders for LOC105375614 Gene

Relevant External Links for LOC105375614

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105375614

No disorders were found for LOC105375614 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375614 Gene

Publications for LOC105375614 Gene

No publications were found for LOC105375614 Gene.

Products for LOC105375614 Gene

Sources for LOC105375614 Gene

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