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Aliases for LOC105375368 Gene

Subcategory (RNA class) for LOC105375368 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375368 Gene

  • Uncharacterized LOC105375368 3
  • RP5-1185I7.1 5

External Ids for LOC105375368 Gene

Previous GeneCards Identifiers for LOC105375368 Gene

  • GC07U903898

Summaries for LOC105375368 Gene

GeneCards Summary for LOC105375368 Gene

LOC105375368 (Uncharacterized LOC105375368) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375368 Gene

Genomics for LOC105375368 Gene

Regulatory Elements for LOC105375368 Gene

Enhancers for LOC105375368 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G078018 1.3 Ensembl ENCODE 11.4 +29.5 29465 2.9 PKNOX1 FOXA2 CREB3L1 ARNT ZFP64 SIN3A YY1 GLIS2 GATA2 ELK1 LOC105375368 APTR GC07M077998 ENSG00000281008
GH07G077811 0.9 Ensembl ENCODE 9.8 -178.3 -178295 1.9 TEAD1 JUN USF2 DPF2 EP300 ZNF507 SREBF1 JUND RAD51 GATA3 PTPN12 LOC105375368 PHTF2 GC07P077851
GH07G078040 0.7 ENCODE 11.2 +50.0 49995 0.2 CTCF FOXA2 CBX3 RB1 L3MBTL2 CREB3L1 BHLHE40 TEAD4 TRIM22 REST LOC105375368 GC07M077998 ENSG00000281008
GH07G078041 0.6 ENCODE 11.1 +50.3 50315 0.2 CTCF ZFHX2 L3MBTL2 CREB3L1 TARDBP TRIM22 ZBTB33 PRDM10 LOC105375368 GC07M077998 ENSG00000281008
GH07G078124 0.3 FANTOM5 9.9 +134.3 134325 0.3 LOC105375368 ENSG00000281008 GC07M077998
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105375368 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105375368 Gene

Chromosome:
7
Start:
77,990,384 bp from pter
End:
77,996,366 bp from pter
Size:
5,983 bases
Orientation:
Plus strand

Genomic View for LOC105375368 Gene

Genes around LOC105375368 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375368 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375368 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375368 Gene

Proteins for LOC105375368 Gene

Post-translational modifications for LOC105375368 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375368 Gene

Domains & Families for LOC105375368 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375368 Gene

Function for LOC105375368 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375368 Gene

Localization for LOC105375368 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105375368 Gene

Pathways & Interactions for LOC105375368 Gene

SuperPathways for LOC105375368 Gene

No Data Available

Interacting Proteins for LOC105375368 Gene

Gene Ontology (GO) - Biological Process for LOC105375368 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375368 Gene

Drugs & Compounds for LOC105375368 Gene

No Compound Related Data Available

Transcripts for LOC105375368 Gene

mRNA/cDNA for LOC105375368 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375368 Gene

No ASD Table

Relevant External Links for LOC105375368 Gene

GeneLoc Exon Structure for
LOC105375368

Expression for LOC105375368 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375368 Gene

Orthologs for LOC105375368 Gene

Evolution for LOC105375368 Gene

ENSEMBL:
Gene Tree for LOC105375368 (if available)
TreeFam:
Gene Tree for LOC105375368 (if available)

No data available for Orthologs for LOC105375368 Gene

Paralogs for LOC105375368 Gene

No data available for Paralogs for LOC105375368 Gene

Variants for LOC105375368 Gene

Sequence variations from dbSNP and Humsavar for LOC105375368 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000284922 -- 77,991,296(+) GCCAA(C/G)CATCT intron-variant
rs1000505732 -- 77,990,158(+) CCAGC(A/G)TGGGT upstream-variant-2KB
rs1000751134 -- 77,996,132(+) ACAAT(C/T)AGAGC nc-transcript-variant
rs1000962582 -- 77,994,916(+) TGAAG(A/G)AACTG nc-transcript-variant
rs1001776299 -- 77,991,252(+) GAGAA(C/T)AGAAG intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105375368 Gene

Disorders for LOC105375368 Gene

Relevant External Links for LOC105375368

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105375368

No disorders were found for LOC105375368 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105375368 Gene

Publications for LOC105375368 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for LOC105375368 Gene

Sources for LOC105375368 Gene

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