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Aliases for LOC105375258 Gene

Subcategory (RNA class) for LOC105375258 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375258 Gene

  • Uncharacterized LOC105375258 3

External Ids for LOC105375258 Gene

Previous GeneCards Identifiers for LOC105375258 Gene

  • GC07U904055

Summaries for LOC105375258 Gene

GeneCards Summary for LOC105375258 Gene

LOC105375258 (Uncharacterized LOC105375258) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375258 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375258 Gene

Genomics for LOC105375258 Gene

Regulatory Elements for LOC105375258 Gene

Enhancers for LOC105375258 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H044145 1.2 ENCODE dbSUPER 0.7 -0.6 -580 2.5 HDGF PKNOX1 ATF1 ARNT TCF12 GATA2 ATF7 NCOA1 REST ZNF592 POLD2 GCK LOC105375258 MYL7
GH07H044149 0.9 ENCODE dbSUPER 0.7 +3.3 3347 2.3 MAZ ESRRA ZNF687 ZSCAN4 BHLHE40 SREBF1 ZNF217 CTBP1 POLR2A FOSL2 LOC105375258 LOC105375257
GH07H044146 0.8 ENCODE dbSUPER 0.7 -2.1 -2101 0.2 SUZ12 MAX ZBTB33 EZH2 LOC105375258 MYL7
GH07H044162 0.7 ENCODE 0.4 +14.8 14750 0.2 FOXA2 MAX CEBPG RAD21 YY1 HNF4G CEBPB REST GABPA NR2F2 MYL7 POLD2 RNA5SP230 AEBP1 POLM ENSG00000239775 PGAM2 LOC105375257 LOC105375258
GH07H044156 0.7 dbSUPER 0.4 +10.3 10315 3.7 TBP CTCF TAL1 MAX THRB RAD21 YY1 NCOR1 EGR1 NRF1 POLD2 RNA5SP230 AEBP1 POLM PGAM2 ENSG00000239775 GCK LOC105375257 LOC105375258
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105375258 on UCSC Golden Path with GeneCards custom track

Promoters for LOC105375258 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000211794 -1367 201 KLF1 ATF1 NFXL1 RELA MTA3 POLR2A EGR1 EZH2 L3MBTL2 NRF1

Genomic Locations for LOC105375258 Gene

Genomic Locations for LOC105375258 Gene
chr7:44,147,667-44,149,773
(GRCh38/hg38)
Size:
2,107 bases
Orientation:
Plus strand

Genomic View for LOC105375258 Gene

Genes around LOC105375258 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375258 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375258 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375258 Gene

Proteins for LOC105375258 Gene

Post-translational modifications for LOC105375258 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375258 Gene

Domains & Families for LOC105375258 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375258 Gene

Function for LOC105375258 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375258 Gene

Localization for LOC105375258 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375258 Gene

Pathways & Interactions for LOC105375258 Gene

SuperPathways for LOC105375258 Gene

No Data Available

Interacting Proteins for LOC105375258 Gene

Gene Ontology (GO) - Biological Process for LOC105375258 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375258 Gene

Drugs & Compounds for LOC105375258 Gene

No Compound Related Data Available

Transcripts for LOC105375258 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375258 Gene

No ASD Table

Relevant External Links for LOC105375258 Gene

GeneLoc Exon Structure for
LOC105375258

No data available for mRNA/cDNA for LOC105375258 Gene

Expression for LOC105375258 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375258 Gene

Orthologs for LOC105375258 Gene

No data available for Orthologs and Evolution for LOC105375258 Gene

Paralogs for LOC105375258 Gene

No data available for Paralogs for LOC105375258 Gene

Variants for LOC105375258 Gene

Sequence variations from dbSNP and Humsavar for LOC105375258 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs104894005 Pathogenic 44,147,678(-) TGGAC(A/C/G/T)AGAGC nc-transcript-variant, reference, missense, stop-gained
rs104894006 Pathogenic 44,149,992(-) TTCTG(A/C/T)GAGAC downstream-variant-500B, reference, stop-gained
rs104894008 Pathogenic 44,147,732(-) CCTTC(A/G)GGGAC nc-transcript-variant, reference, missense
rs104894009 Pathogenic 44,146,587(-) ACATG(C/G)GCGAG upstream-variant-2KB, reference, missense
rs104894011 Pathogenic 44,147,720(-) CCGGC(G/T)AGCTG nc-transcript-variant, reference, stop-gained

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105375258 Gene

Disorders for LOC105375258 Gene

No disorders were found for LOC105375258 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375258 Gene

Publications for LOC105375258 Gene

No publications were found for LOC105375258 Gene.

Products for LOC105375258 Gene

Sources for LOC105375258 Gene

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