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Aliases for LOC105375228 Gene

Subcategory (RNA class) for LOC105375228 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375228 Gene

  • Uncharacterized LOC105375228 3

External Ids for LOC105375228 Gene

Previous GeneCards Identifiers for LOC105375228 Gene

  • GC07U904237

Summaries for LOC105375228 Gene

GeneCards Summary for LOC105375228 Gene

LOC105375228 (Uncharacterized LOC105375228) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375228 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375228 Gene

Genomics for LOC105375228 Gene

Regulatory Elements for LOC105375228 Gene

Enhancers for LOC105375228 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H035034 1 ENCODE 0.7 +1.8 1786 3 PKNOX1 ATF1 ARID4B SIN3A ZNF2 YY1 GLIS2 ELK1 ZNF143 ZNF207 DPY19L1 LOC105375228
GH07H035024 1.1 ENCODE dbSUPER 0.4 -9.1 -9094 2 NFIB ZFP64 SIN3A RFX5 FOS ATF7 ETV6 RUNX3 EGR2 HCFC1 DPY19L1 LOC105375228 MIR548N
GH07H035002 1.4 Ensembl ENCODE dbSUPER 0.3 -30.8 -30776 3 HDAC1 PKNOX1 ATF1 INSM2 KLF17 SIN3A FEZF1 TCF12 ZNF366 ZNF416 DPY19L1 LOC105375228 MIR548N
GH07H035014 1 ENCODE dbSUPER 0.4 -19.5 -19469 1 HDAC1 PKNOX1 ATF1 GTF2E2 ETV1 BACH1 ZNF175 FOSL1 GATA3 CTBP1 DPY19L1 LOC105375228 MIR548N
GH07H034990 1.2 Ensembl ENCODE dbSUPER 0.3 -43.2 -43232 2 SMARCA5 ZNF687 L3MBTL2 JUN BHLHE40 MAX JUNB DPF2 BATF ZNF7 DPY19L1 LOC105375228 MIR548N
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105375228 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105375228 Gene

Chromosome:
7
Start:
35,035,034 bp from pter
End:
35,036,050 bp from pter
Size:
1,017 bases
Orientation:
Plus strand

Genomic View for LOC105375228 Gene

Genes around LOC105375228 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375228 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375228 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375228 Gene

Proteins for LOC105375228 Gene

Post-translational modifications for LOC105375228 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375228 Gene

Domains & Families for LOC105375228 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375228 Gene

Function for LOC105375228 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375228 Gene

Localization for LOC105375228 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375228 Gene

Pathways & Interactions for LOC105375228 Gene

SuperPathways for LOC105375228 Gene

No Data Available

Interacting Proteins for LOC105375228 Gene

Gene Ontology (GO) - Biological Process for LOC105375228 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375228 Gene

Drugs & Compounds for LOC105375228 Gene

No Compound Related Data Available

Transcripts for LOC105375228 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375228 Gene

No ASD Table

Relevant External Links for LOC105375228 Gene

GeneLoc Exon Structure for
LOC105375228

No data available for mRNA/cDNA for LOC105375228 Gene

Expression for LOC105375228 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375228 Gene

Orthologs for LOC105375228 Gene

No data available for Orthologs and Evolution for LOC105375228 Gene

Paralogs for LOC105375228 Gene

No data available for Paralogs for LOC105375228 Gene

Variants for LOC105375228 Gene

Sequence variations from dbSNP and Humsavar for LOC105375228 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000034926 -- 35,069,589(+) CCATA(C/T)AGAGT intron-variant
rs1000191968 -- 35,069,352(+) GAGGG(A/G)CCAAG intron-variant
rs1000219114 -- 35,050,013(+) TGTGT(C/T)TTTAT intron-variant
rs1000287500 -- 35,098,606(+) TGGCA(C/G)ATATA intron-variant
rs1000327796 -- 35,081,917(+) TGAAA(G/T)TAAGC intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105375228 Gene

Disorders for LOC105375228 Gene

No disorders were found for LOC105375228 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375228 Gene

Publications for LOC105375228 Gene

No publications were found for LOC105375228 Gene.

Products for LOC105375228 Gene

Sources for LOC105375228 Gene

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