Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105375222 Gene

Subcategory (RNA class) for LOC105375222 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375222 Gene

  • Uncharacterized LOC105375222 3

External Ids for LOC105375222 Gene

Previous GeneCards Identifiers for LOC105375222 Gene

  • GC07U904154

Summaries for LOC105375222 Gene

GeneCards Summary for LOC105375222 Gene

LOC105375222 (Uncharacterized LOC105375222) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375222 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375222 Gene

Genomics for LOC105375222 Gene

Regulatory Elements for LOC105375222 Gene

Enhancers for LOC105375222 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H030988 1.3 FANTOM5 ENCODE dbSUPER 0.7 +4.8 4825 1 PKNOX1 ESRRA SIN3A KLF17 CEBPG BMI1 ZBTB7B RFX5 CTBP1 POLR2A ADCYAP1R1 LOC105375222 LOC105375221
GH07H030983 0.7 ENCODE 0.7 -0.1 -98 0 CTCF RB1 ZIC2 ZNF2 RAD21 CC2D1A GLIS2 POLR2A SMC3 ZNF143 LOC105375222 GHRHR
GH07H030974 0.9 ENCODE 0.4 -8.9 -8888 0 HDGF ATF1 RB1 THRB RAD21 RARA ZNF143 ZNF207 ATF7 RUNX3 LOC105375222 GHRHR
GH07H030993 0.8 FANTOM5 dbSUPER 0.4 +10.0 10024 0 ZNF316 NFYB FOS EMSY CRHR2 MINDY4 LOC105375221 LOC105375222
GH07H030985 0.4 ENCODE 0.7 +1.1 1096 1 POLR2A KLF9 ADCYAP1R1 LOC105375222 LOC105375221
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105375222 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105375222 Gene

Chromosome:
7
Start:
30,983,868 bp from pter
End:
31,031,031 bp from pter
Size:
47,164 bases
Orientation:
Plus strand

Genomic View for LOC105375222 Gene

Genes around LOC105375222 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375222 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375222 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375222 Gene

Proteins for LOC105375222 Gene

Post-translational modifications for LOC105375222 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375222 Gene

Domains & Families for LOC105375222 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375222 Gene

Function for LOC105375222 Gene

Phenotypes From GWAS Catalog for LOC105375222 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375222 Gene

Localization for LOC105375222 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375222 Gene

Pathways & Interactions for LOC105375222 Gene

SuperPathways for LOC105375222 Gene

No Data Available

Interacting Proteins for LOC105375222 Gene

Gene Ontology (GO) - Biological Process for LOC105375222 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375222 Gene

Drugs & Compounds for LOC105375222 Gene

No Compound Related Data Available

Transcripts for LOC105375222 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375222 Gene

No ASD Table

Relevant External Links for LOC105375222 Gene

GeneLoc Exon Structure for
LOC105375222

No data available for mRNA/cDNA for LOC105375222 Gene

Expression for LOC105375222 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375222 Gene

Orthologs for LOC105375222 Gene

No data available for Orthologs and Evolution for LOC105375222 Gene

Paralogs for LOC105375222 Gene

No data available for Paralogs for LOC105375222 Gene

Variants for LOC105375222 Gene

Sequence variations from dbSNP and Humsavar for LOC105375222 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000011049 -- 31,029,273(+) GCTAA(C/T)GTCTC nc-transcript-variant
rs1000158299 -- 31,023,208(+) GGGGA(A/G)GCTGA intron-variant
rs1000196031 -- 30,987,044(+) GAGGG(C/T)GGGGG intron-variant
rs1000226602 -- 30,984,599(+) TTCCG(C/G)TAGGA intron-variant
rs1000275160 -- 30,990,131(+) TTCAC(A/G)CAAGG intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105375222 Gene

Disorders for LOC105375222 Gene

No disorders were found for LOC105375222 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375222 Gene

Publications for LOC105375222 Gene

No publications were found for LOC105375222 Gene.

Products for LOC105375222 Gene

Sources for LOC105375222 Gene

Content
Loading form....