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Aliases for LOC105375038 Gene

Subcategory (RNA class) for LOC105375038 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105375038 Gene

  • Uncharacterized LOC105375038 3

External Ids for LOC105375038 Gene

Previous GeneCards Identifiers for LOC105375038 Gene

  • GC06U902979
  • GC06P036968
  • GC06P037816
  • GC06P038445
  • GC06P039044
  • GC06P039632

Summaries for LOC105375038 Gene

GeneCards Summary for LOC105375038 Gene

LOC105375038 (Uncharacterized LOC105375038) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375038 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375038 Gene

Genomics for LOC105375038 Gene

Regulatory Elements for LOC105375038 Gene

Enhancers for LOC105375038 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H036633 1 Ensembl ENCODE 0.7 -4.9 -4935 1 ELF3 SOX13 SAP130 ZFP64 FEZF1 ZNF2 RAD21 RARA ZNF7 YY1 ETV7 KCTD20 STK38 LOC105375038 MIR3925
GH06H036623 1.5 Ensembl ENCODE dbSUPER 0.4 -14.6 -14576 2 HDGF PKNOX1 ATF1 ARID4B ZNF2 SLC30A9 ZNF143 ZNF207 ATF7 RUNX3 ENSG00000251864 LAP3P2 CDKN1A CMTR1 RAB44 KCTD20 BRPF3 PI16 C6orf89 MIR3925
GH06H036627 1.2 Ensembl ENCODE dbSUPER 0.4 -10.5 -10459 2 HDGF EBF1 RELA ZFHX2 EED RUNX3 IKZF2 CREM EGR2 SMARCA5 KCTD20 ETV7 MIR3925 LOC105375038
GH06H036622 0.6 Ensembl dbSUPER 0.4 -16.5 -16495 0 MAX LAP3P2 CDKN1A ENSG00000251864 RAB44 PI16 C6orf89 MIR3925 LOC105375038
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105375038 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105375038 Gene

Chromosome:
6
Start:
36,639,111 bp from pter
End:
36,642,010 bp from pter
Size:
2,900 bases
Orientation:
Plus strand

Genomic View for LOC105375038 Gene

Genes around LOC105375038 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375038 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375038 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375038 Gene

Proteins for LOC105375038 Gene

Post-translational modifications for LOC105375038 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375038 Gene

Domains & Families for LOC105375038 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375038 Gene

Function for LOC105375038 Gene

Phenotypes From GWAS Catalog for LOC105375038 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375038 Gene

Localization for LOC105375038 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375038 Gene

Pathways & Interactions for LOC105375038 Gene

SuperPathways for LOC105375038 Gene

No Data Available

Interacting Proteins for LOC105375038 Gene

Gene Ontology (GO) - Biological Process for LOC105375038 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375038 Gene

Drugs & Compounds for LOC105375038 Gene

No Compound Related Data Available

Transcripts for LOC105375038 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375038 Gene

No ASD Table

Relevant External Links for LOC105375038 Gene

GeneLoc Exon Structure for
LOC105375038

No data available for mRNA/cDNA for LOC105375038 Gene

Expression for LOC105375038 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375038 Gene

Orthologs for LOC105375038 Gene

No data available for Orthologs and Evolution for LOC105375038 Gene

Paralogs for LOC105375038 Gene

No data available for Paralogs for LOC105375038 Gene

Variants for LOC105375038 Gene

Sequence variations from dbSNP and Humsavar for LOC105375038 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000834874 -- 36,641,314(+) CCTAA(C/T)CCAAT intron-variant
rs1000989778 -- 36,641,609(+) TTCTG(C/T)CTTTA nc-transcript-variant
rs1001051586 -- 36,639,037(+) AATAG(C/T)GGGAA nc-transcript-variant
rs1001773114 -- 36,640,188(+) ACCTC(C/T)GCCTC intron-variant
rs1002211165 -- 36,638,578(+) CCCAG(C/T)AAGAC upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105375038 Gene

Disorders for LOC105375038 Gene

No disorders were found for LOC105375038 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375038 Gene

Publications for LOC105375038 Gene

No publications were found for LOC105375038 Gene.

Products for LOC105375038 Gene

Sources for LOC105375038 Gene

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