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Aliases for LOC105375037 Gene

Subcategory (RNA class) for LOC105375037 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105375037 Gene

  • Uncharacterized LOC105375037 3
  • Z84484.1 5

External Ids for LOC105375037 Gene

Previous GeneCards Identifiers for LOC105375037 Gene

  • GC06U903236
  • GC06P036960
  • GC06P037815
  • GC06P038444
  • GC06P039043
  • GC06P039631

Summaries for LOC105375037 Gene

GeneCards Summary for LOC105375037 Gene

LOC105375037 (Uncharacterized LOC105375037) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105375037 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105375037 Gene

Genomics for LOC105375037 Gene

Regulatory Elements for LOC105375037 Gene

Enhancers for LOC105375037 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H036422 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.1 +37.1 37135 1 MLX ARID4B SIN3A ZNF2 YY1 ZNF766 ZNF143 ZNF207 FOS DEK ETV7 KCTD20 LOC105375037 C6orf222 STK38 PI16 MAPK13 PXT1 SRSF3 CDKN1A
GH06H036357 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.3 -27.9 -27868 1 HDGF PKNOX1 TBL1XR1 BMI1 BATF RFX5 GATA2 ATF7 RUNX3 CREM C6orf222 LOC105375037 ETV7 FGD2 MAPK13 PXT1 KCTD20 PNPLA1 CPNE5 PIR35042
GH06H036439 1.8 FANTOM5 ENCODE dbSUPER 10.6 +56.5 56453 6 MLX FEZF1 DMAP1 YY1 ZNF143 SP3 NFYC ZC3H11A MEF2D SSRP1 ETV7 KCTD20 SRSF3 TEAD3 PXT1 LOC105375037 RNF8 CDKN1A RPL10A PI16
GH06H036360 1.4 Ensembl ENCODE dbSUPER 11.3 -25.7 -25745 1 ELF3 RB1 ARID4B RAD21 RFX5 SLC30A9 SCRT2 ZNF143 ATF7 RUNX3 C6orf222 ETV7 LOC105375037 KCTD20 PXT1 PNPLA1 PIR35042
GH06H036477 1.4 Ensembl ENCODE dbSUPER 10.2 +91.9 91865 0 HDAC1 ATF1 RB1 TBL1XR1 ARNT CHAMP1 TCF12 ZNF766 GATA2 ATF7 KCTD20 PXT1 STK38 PI16 LOC105375037 ETV7 RAB44 PIR61796 RN7SL502P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105375037 on UCSC Golden Path with GeneCards custom track

Promoters for LOC105375037 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000196201 306 1000 NFIC GATA3 IRF2 NFIA NFIB IKZF1 CTBP2
ENSR00000320453 1405 401 CTCF STAT1 SUZ12 NR2F1 EBF1 EED MXD3 ETV6 RUNX3 EZH2

Genomic Location for LOC105375037 Gene

Chromosome:
6
Start:
36,386,395 bp from pter
End:
36,393,462 bp from pter
Size:
7,068 bases
Orientation:
Plus strand

Genomic View for LOC105375037 Gene

Genes around LOC105375037 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105375037 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105375037 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105375037 Gene

Proteins for LOC105375037 Gene

Post-translational modifications for LOC105375037 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105375037 Gene

Domains & Families for LOC105375037 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105375037 Gene

Function for LOC105375037 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105375037 Gene

Localization for LOC105375037 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105375037 Gene

Pathways & Interactions for LOC105375037 Gene

SuperPathways for LOC105375037 Gene

No Data Available

Interacting Proteins for LOC105375037 Gene

Gene Ontology (GO) - Biological Process for LOC105375037 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105375037 Gene

Drugs & Compounds for LOC105375037 Gene

No Compound Related Data Available

Transcripts for LOC105375037 Gene

mRNA/cDNA for LOC105375037 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105375037 Gene

No ASD Table

Relevant External Links for LOC105375037 Gene

GeneLoc Exon Structure for
LOC105375037

Expression for LOC105375037 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105375037 Gene

Orthologs for LOC105375037 Gene

Evolution for LOC105375037 Gene

ENSEMBL:
Gene Tree for LOC105375037 (if available)
TreeFam:
Gene Tree for LOC105375037 (if available)

No data available for Orthologs for LOC105375037 Gene

Paralogs for LOC105375037 Gene

No data available for Paralogs for LOC105375037 Gene

Variants for LOC105375037 Gene

Sequence variations from dbSNP and Humsavar for LOC105375037 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000977140 -- 36,386,958(+) GGCTG(-/TAAC)TAACT intron-variant, upstream-variant-2KB
rs1001029520 -- 36,387,194(+) CCAGC(C/T)GTGAG intron-variant, upstream-variant-2KB
rs1001101844 -- 36,389,502(+) CAAGC(C/T)CTCCA intron-variant, upstream-variant-2KB
rs1001581937 -- 36,386,073(+) CTATA(A/G)TCTCA intron-variant, upstream-variant-2KB
rs1002315393 -- 36,387,714(+) GGCGT(A/G)TGCGC intron-variant, upstream-variant-2KB, utr-variant-5-prime

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105375037 Gene

Disorders for LOC105375037 Gene

No disorders were found for LOC105375037 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105375037 Gene

Publications for LOC105375037 Gene

No publications were found for LOC105375037 Gene.

Products for LOC105375037 Gene

Sources for LOC105375037 Gene

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