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Aliases for LOC105374934 Gene

Subcategory (RNA class) for LOC105374934 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374934 Gene

  • Uncharacterized LOC105374934 3

External Ids for LOC105374934 Gene

Previous GeneCards Identifiers for LOC105374934 Gene

  • GC06U903111

Summaries for LOC105374934 Gene

GeneCards Summary for LOC105374934 Gene

LOC105374934 (Uncharacterized LOC105374934) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374934 Gene

Genomics for LOC105374934 Gene

Regulatory Elements for LOC105374934 Gene

Enhancers for LOC105374934 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G012748 1.1 Ensembl ENCODE 0.2 +85.1 85084 1.5 KLF1 MXI1 ZNF133 RBBP5 RAD21 ZFHX2 ZNF366 SCRT2 SMC3 MAFK RPL15P3 PHACTR1 LOC105374935 LOC105374934
GH06G012893 1 Ensembl ENCODE 0.2 -59.2 -59163 0.6 HNRNPUL1 CTCF PKNOX1 KLF1 MXI1 RAD21 ZBTB48 ZNF143 SMC3 KLF7 PHACTR1 LOC105374934 GC06M012692
GH06G012801 0.6 ENCODE 0.3 +33.5 33473 0.2 GATA3 MNT FOS CEBPG HES1 FOXA1 PHACTR1 ENSG00000272379 LOC105374934 LOC105374935
GH06G012886 0.7 ENCODE 0.2 -52.4 -52356 1.2 ZNF263 CBX3 TEAD4 MAX CHD7 ZFHX2 HDAC2 ZNF341 CTBP2 PRDM10 LOC105374934 GC06M012692
GH06G012874 0.4 ENCODE 0.3 -40.4 -40403 1.0 ZNF316 MAFK PHACTR1 LOC105374934 GC06M012692
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105374934 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105374934 Gene

Chromosome:
6
Start:
12,828,524 bp from pter
End:
12,834,796 bp from pter
Size:
6,273 bases
Orientation:
Minus strand

Genomic View for LOC105374934 Gene

Genes around LOC105374934 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374934 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374934 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374934 Gene

Proteins for LOC105374934 Gene

Post-translational modifications for LOC105374934 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374934 Gene

Domains & Families for LOC105374934 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374934 Gene

Function for LOC105374934 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374934 Gene

Localization for LOC105374934 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105374934 Gene

Pathways & Interactions for LOC105374934 Gene

SuperPathways for LOC105374934 Gene

No Data Available

Interacting Proteins for LOC105374934 Gene

Gene Ontology (GO) - Biological Process for LOC105374934 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374934 Gene

Drugs & Compounds for LOC105374934 Gene

No Compound Related Data Available

Transcripts for LOC105374934 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374934 Gene

No ASD Table

Relevant External Links for LOC105374934 Gene

GeneLoc Exon Structure for
LOC105374934

No data available for mRNA/cDNA for LOC105374934 Gene

Expression for LOC105374934 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374934 Gene

Orthologs for LOC105374934 Gene

No data available for Orthologs and Evolution for LOC105374934 Gene

Paralogs for LOC105374934 Gene

No data available for Paralogs for LOC105374934 Gene

Variants for LOC105374934 Gene

Sequence variations from dbSNP and Humsavar for LOC105374934 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000055128 -- 12,830,824(+) CTCCC(A/G)ACCTC intron-variant
rs1000371993 -- 12,829,322(+) CTGTT(C/T)ACATG intron-variant
rs1000708406 -- 12,827,952(+) TACTC(A/C)TTAGT intron-variant, downstream-variant-500B
rs1000947400 -- 12,829,446(+) AGGAG(G/T)TGATG intron-variant
rs1001062016 -- 12,829,713(+) ACTTT(A/G)GGAGG intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105374934 Gene

Disorders for LOC105374934 Gene

No disorders were found for LOC105374934 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374934 Gene

Publications for LOC105374934 Gene

No publications were found for LOC105374934 Gene.

Products for LOC105374934 Gene

Sources for LOC105374934 Gene

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