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Aliases for LOC105374466 Gene

Subcategory (RNA class) for LOC105374466 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374466 Gene

  • Uncharacterized LOC105374466 3
  • AC009229.4 5

External Ids for LOC105374466 Gene

Previous GeneCards Identifiers for LOC105374466 Gene

  • GC02U903167

Summaries for LOC105374466 Gene

GeneCards Summary for LOC105374466 Gene

LOC105374466 (Uncharacterized LOC105374466) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374466 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374466 Gene

Genomics for LOC105374466 Gene

Regulatory Elements for LOC105374466 Gene

Enhancers for LOC105374466 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H038128 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -5.4 -5420 2 PKNOX1 BACH1 MAX BMI1 BATF RAD21 YY1 FOSL1 ELK1 NCOR1 CYP1B1 CYP1B1-AS1 CDC42EP3 LOC105374466 GC02M038122 ENSG00000229160
GH02H038113 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.6 9581 1 FOXA2 RFX1 MAX FEZF1 NR2F2 YY1 ATF3 HNF4A RUNX3 SPI1 CYP1B1 CDC42EP3 LOC105374466 GC02M038122
GH02H038115 1.3 Ensembl ENCODE dbSUPER 0.4 +8.1 8081 1 ELF3 CTCF PKNOX1 RB1 CEBPG BATF RAD21 YY1 SMC3 ZNF143 ATL2 GC02M038122 CYP1B1 LOC105374466
GH02H038125 0.6 dbSUPER 0.7 -2.5 -2481 1 PKNOX1 PRDM6 FEZF1 ZNF501 ZNF843 WT1 GC02M038122 LOC105374466 ENSG00000229160
GH02H038116 0.8 ENCODE dbSUPER 0.4 +6.9 6908 0 JUND JUN JUNB FOS BATF EP300 GC02M038122 CYP1B1 LOC105374466
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105374466 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105374466 Gene

Chromosome:
2
Start:
38,112,991 bp from pter
End:
38,123,881 bp from pter
Size:
10,891 bases
Orientation:
Minus strand

Genomic View for LOC105374466 Gene

Genes around LOC105374466 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374466 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374466 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374466 Gene

Proteins for LOC105374466 Gene

Post-translational modifications for LOC105374466 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374466 Gene

Domains & Families for LOC105374466 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374466 Gene

Function for LOC105374466 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374466 Gene

Localization for LOC105374466 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374466 Gene

Pathways & Interactions for LOC105374466 Gene

SuperPathways for LOC105374466 Gene

No Data Available

Interacting Proteins for LOC105374466 Gene

Gene Ontology (GO) - Biological Process for LOC105374466 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374466 Gene

Drugs & Compounds for LOC105374466 Gene

No Compound Related Data Available

Transcripts for LOC105374466 Gene

mRNA/cDNA for LOC105374466 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374466 Gene

No ASD Table

Relevant External Links for LOC105374466 Gene

GeneLoc Exon Structure for
LOC105374466

Expression for LOC105374466 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374466 Gene

Orthologs for LOC105374466 Gene

Evolution for LOC105374466 Gene

ENSEMBL:
Gene Tree for LOC105374466 (if available)
TreeFam:
Gene Tree for LOC105374466 (if available)

No data available for Orthologs for LOC105374466 Gene

Paralogs for LOC105374466 Gene

No data available for Paralogs for LOC105374466 Gene

Variants for LOC105374466 Gene

Sequence variations from dbSNP and Humsavar for LOC105374466 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000093616 -- 38,123,106(+) TTCTG(C/T)TCTTC intron-variant
rs1000136450 -- 38,135,514(+) GTTAG(A/G)GTGTC intron-variant
rs1000188897 -- 38,137,847(+) TGTCA(G/T)TCCGC intron-variant
rs1000199211 -- 38,113,856(+) TAGAG(A/G)GAAAC intron-variant
rs1000332322 -- 38,131,958(+) GAACT(A/G)GAGAG intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105374466 Gene

Disorders for LOC105374466 Gene

No disorders were found for LOC105374466 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374466 Gene

Publications for LOC105374466 Gene

No publications were found for LOC105374466 Gene.

Products for LOC105374466 Gene

Sources for LOC105374466 Gene

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