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Aliases for LOC105374363 Gene

Subcategory (RNA class) for LOC105374363 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374363 Gene

  • Uncharacterized LOC105374363 3
  • AC074117.1 5

External Ids for LOC105374363 Gene

Previous GeneCards Identifiers for LOC105374363 Gene

  • GC02U903471

Summaries for LOC105374363 Gene

GeneCards Summary for LOC105374363 Gene

LOC105374363 (Uncharacterized LOC105374363) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374363 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374363 Gene

Genomics for LOC105374363 Gene

Regulatory Elements for LOC105374363 Gene

Enhancers for LOC105374363 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H027069 2 FANTOM5 Ensembl ENCODE dbSUPER 22.4 -279.8 -279753 14.9 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B SIN3A DMAP1 YBX1 YY1 GTF3C2 CAD GPN1 SNX17 KHK NRBP1 EMILIN1 ATRAID EIF2B4 LOC105374363
GH02H027719 1.9 FANTOM5 Ensembl ENCODE dbSUPER 18.9 +364.5 364502 2.5 SIN3A GLI4 BRCA1 ZNF2 ZNF416 ATF7 FOS SP3 TSHZ1 ZNF623 SUPT7L CAD ZNF512 EIF2B4 GPN1 GTF3C2 ZNF513 AGBL5 GTF3C2-AS1 LOC105374363
GH02H026717 2.2 VISTA FANTOM5 Ensembl ENCODE dbSUPER 14.7 -634.0 -633992 10.1 HDGF FOXA2 MLX SIN3A DMAP1 YY1 ZNF766 FOS SP5 REST EIF2B4 GPN1 CAD NRBP1 GTF3C2-AS1 ASXL2 CENPA LOC105374363 KCNK3 TMEM214
GH02H027049 1.2 ENCODE 25.1 -305.2 -305178 3.2 MLX ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC PPARGC1A ZNF512 CAD EIF2B4 NRBP1 IFT172 SUPT7L GPN1 KHK LOC105374363 ATRAID
GH02H026754 2 FANTOM5 Ensembl ENCODE dbSUPER 14.4 -598.8 -598837 5.8 PKNOX1 FOXA2 ARNT SIN3A YY1 SLC30A9 ZNF766 FOS SP3 SP5 EIF2B4 GPN1 CAD LOC105374363 GTF3C2 NRBP1 TMEM214 KCNK3 KHK SUPT7L
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105374363 on UCSC Golden Path with GeneCards custom track

Promoters for LOC105374363 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000114418 454 2201 PKNOX1 FOXA2 MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B

Genomic Locations for LOC105374363 Gene

Genomic Locations for LOC105374363 Gene
chr2:27,356,246-27,367,622
(GRCh38/hg38)
Size:
11,377 bases
Orientation:
Plus strand
chr2:27,579,113-27,590,489
(GRCh37/hg19)

Genomic View for LOC105374363 Gene

Genes around LOC105374363 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374363 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374363 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374363 Gene

Proteins for LOC105374363 Gene

Post-translational modifications for LOC105374363 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374363 Gene

Domains & Families for LOC105374363 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374363 Gene

Function for LOC105374363 Gene

Phenotypes From GWAS Catalog for LOC105374363 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374363 Gene

Localization for LOC105374363 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374363 Gene

Pathways & Interactions for LOC105374363 Gene

SuperPathways for LOC105374363 Gene

No Data Available

Interacting Proteins for LOC105374363 Gene

Gene Ontology (GO) - Biological Process for LOC105374363 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374363 Gene

Drugs & Compounds for LOC105374363 Gene

No Compound Related Data Available

Transcripts for LOC105374363 Gene

mRNA/cDNA for LOC105374363 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374363 Gene

No ASD Table

Relevant External Links for LOC105374363 Gene

GeneLoc Exon Structure for
LOC105374363

Expression for LOC105374363 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374363 Gene

Orthologs for LOC105374363 Gene

Evolution for LOC105374363 Gene

ENSEMBL:
Gene Tree for LOC105374363 (if available)
TreeFam:
Gene Tree for LOC105374363 (if available)

No data available for Orthologs for LOC105374363 Gene

Paralogs for LOC105374363 Gene

No data available for Paralogs for LOC105374363 Gene

Variants for LOC105374363 Gene

Sequence variations from dbSNP and Humsavar for LOC105374363 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000054444 -- 27,357,770(+) GCATG(A/G)GCCAC intron-variant, upstream-variant-2KB
rs1000205247 -- 27,354,276(+) AGATC(G/T)TGTCT intron-variant, upstream-variant-2KB
rs1000464318 -- 27,356,677(+) TATGG(C/T)AAAAG intron-variant, nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs1001059047 -- 27,356,828(+) GCTCT(G/T)CACTG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs1001105197 -- 27,358,134(+) TATGG(G/T)TAGGA nc-transcript-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105374363 Gene

Disorders for LOC105374363 Gene

Relevant External Links for LOC105374363

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105374363

No disorders were found for LOC105374363 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105374363 Gene

Publications for LOC105374363 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 60

Products for LOC105374363 Gene

Sources for LOC105374363 Gene

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