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Aliases for LOC105374355 Gene

Subcategory (RNA class) for LOC105374355 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105374355 Gene

  • Uncharacterized LOC105374355 3

External Ids for LOC105374355 Gene

Previous GeneCards Identifiers for LOC105374355 Gene

  • GC04U901992

Summaries for LOC105374355 Gene

GeneCards Summary for LOC105374355 Gene

LOC105374355 (Uncharacterized LOC105374355) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374355 Gene

Genomics for LOC105374355 Gene

Regulatory Elements for LOC105374355 Gene

Enhancers for LOC105374355 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04G003472 0.5 dbSUPER 0.7 +3.2 3240 1.9 RING1 RFX1 ZSCAN29 NOP14-AS1 LINC00955 LRPAP1 DOK7 LOC105374355 GC04P003463
GH04G003470 0.8 ENCODE dbSUPER 0.4 +5.6 5612 0.1 NFIC NFIB BHLHE40 SCRT2 ZNF10 ZBTB40 ZBTB20 LRPAP1 LOC105374355 GC04P003463
GH04G003466 0.7 dbSUPER 0.4 +9.9 9928 1.7 CTCF ESRRA RFX1 ZSCAN4 MNT PAX8 RAD21 ATF2 ZEB1 ZBTB48 DOK7 GC04P003463 LOC105374355
GH04G003467 0.6 dbSUPER 0.4 +8.7 8704 0.7 ZSCAN4 MNT PAX8 ATF2 ZEB1 RARA ZBTB48 TARDBP CREB1 ZBTB33 DOK7 GC04P003463 LOC105374355
GH04G003469 0.6 dbSUPER 0.4 +6.3 6310 1.1 NFIC NFIB ZFP64 ZBTB40 ZBTB20 RARA LRPAP1 MSANTD1 DOK7 GC04P003463 LOC105374355
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105374355 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105374355 Gene

Chromosome:
4
Start:
3,474,938 bp from pter
End:
3,476,390 bp from pter
Size:
1,453 bases
Orientation:
Minus strand

Genomic View for LOC105374355 Gene

Genes around LOC105374355 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374355 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374355 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374355 Gene

Proteins for LOC105374355 Gene

Post-translational modifications for LOC105374355 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374355 Gene

Domains & Families for LOC105374355 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374355 Gene

Function for LOC105374355 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374355 Gene

Localization for LOC105374355 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105374355 Gene

Pathways & Interactions for LOC105374355 Gene

SuperPathways for LOC105374355 Gene

No Data Available

Interacting Proteins for LOC105374355 Gene

Gene Ontology (GO) - Biological Process for LOC105374355 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374355 Gene

Drugs & Compounds for LOC105374355 Gene

No Compound Related Data Available

Transcripts for LOC105374355 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374355 Gene

No ASD Table

Relevant External Links for LOC105374355 Gene

GeneLoc Exon Structure for
LOC105374355

No data available for mRNA/cDNA for LOC105374355 Gene

Expression for LOC105374355 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374355 Gene

Orthologs for LOC105374355 Gene

No data available for Orthologs and Evolution for LOC105374355 Gene

Paralogs for LOC105374355 Gene

No data available for Paralogs for LOC105374355 Gene

Variants for LOC105374355 Gene

Sequence variations from dbSNP and Humsavar for LOC105374355 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs200487431 Likely benign 3,476,560(+) GTGTG(A/G)GGTCA intron-variant, upstream-variant-2KB
rs114112298 Benign 3,476,293(+) GATGT(C/G/T)CTCTC intron-variant, upstream-variant-2KB
rs2699425 Benign 3,476,324(+) CCTCT(C/T)GCCCC intron-variant, upstream-variant-2KB
rs199578351 other 3,476,338(+) TGCCC(A/G)CAGTG intron-variant, upstream-variant-2KB
rs1000403472 -- 3,478,197(+) GCACA(A/G)CAGGA intron-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105374355 Gene

Disorders for LOC105374355 Gene

No disorders were found for LOC105374355 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374355 Gene

Publications for LOC105374355 Gene

No publications were found for LOC105374355 Gene.

Products for LOC105374355 Gene

Sources for LOC105374355 Gene

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