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Aliases for LOC105374041 Gene

Subcategory (RNA class) for LOC105374041 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105374041 Gene

  • Uncharacterized LOC105374041 3
  • AC092894.1 5

External Ids for LOC105374041 Gene

Previous GeneCards Identifiers for LOC105374041 Gene

  • GC03U902390

Summaries for LOC105374041 Gene

GeneCards Summary for LOC105374041 Gene

LOC105374041 (Uncharacterized LOC105374041) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105374041 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105374041 Gene

Genomics for LOC105374041 Gene

Regulatory Elements for LOC105374041 Gene

Enhancers for LOC105374041 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H112389 1.4 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +18.1 18076 3 SOX13 PKNOX1 JUND JUN POU5F1 RUNX3 ETS1 CD200 BTLA MIR567 C3orf52 LOC105374041 GC03M112363
GH03H112407 0.7 ENCODE 0.7 +1.7 1713 0 ZNF687 NR2F1 TRIM22 ELF1 EBF1 RELA ZNF217 EED TARDBP IKZF1 CD200 LOC105374041 GC03M112363
GH03H112376 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +30.8 30757 3 JUN NR2F1 CEBPB MAX EBF1 EP300 RFX5 JUND PRDM6 GLIS1 CD200 SLC9C1 ATG3 GC03M112363 LOC105374041
GH03H112393 0.9 Ensembl ENCODE dbSUPER 0.4 +13.2 13226 4 GATA3 JUN CD200 BTLA MIR567 C3orf52 LOC105374041 GC03M112363
GH03H112406 0.5 Ensembl 0.7 +3.0 3034 0 NR2F1 RUNX3 ZNF592 SPI1 CD200 LOC105374041 GC03M112363
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105374041 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105374041 Gene

Chromosome:
3
Start:
112,375,689 bp from pter
End:
112,409,134 bp from pter
Size:
33,446 bases
Orientation:
Minus strand

Genomic View for LOC105374041 Gene

Genes around LOC105374041 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105374041 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105374041 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105374041 Gene

Proteins for LOC105374041 Gene

Post-translational modifications for LOC105374041 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105374041 Gene

Domains & Families for LOC105374041 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105374041 Gene

Function for LOC105374041 Gene

Phenotypes From GWAS Catalog for LOC105374041 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105374041 Gene

Localization for LOC105374041 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105374041 Gene

Pathways & Interactions for LOC105374041 Gene

SuperPathways for LOC105374041 Gene

No Data Available

Interacting Proteins for LOC105374041 Gene

Gene Ontology (GO) - Biological Process for LOC105374041 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105374041 Gene

Drugs & Compounds for LOC105374041 Gene

No Compound Related Data Available

Transcripts for LOC105374041 Gene

mRNA/cDNA for LOC105374041 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105374041 Gene

No ASD Table

Relevant External Links for LOC105374041 Gene

GeneLoc Exon Structure for
LOC105374041

Expression for LOC105374041 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105374041 Gene

Orthologs for LOC105374041 Gene

Evolution for LOC105374041 Gene

ENSEMBL:
Gene Tree for LOC105374041 (if available)
TreeFam:
Gene Tree for LOC105374041 (if available)

No data available for Orthologs for LOC105374041 Gene

Paralogs for LOC105374041 Gene

No data available for Paralogs for LOC105374041 Gene

Variants for LOC105374041 Gene

Sequence variations from dbSNP and Humsavar for LOC105374041 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs1000284723 -- 112,383,485(+) CCCAG(G/T)GGCCT intron-variant
rs1000337542 -- 112,383,720(+) CAAAG(A/C)GAGGA intron-variant
rs1000523391 -- 112,390,236(+) TGTGA(A/G)GATGA intron-variant
rs1000671230 -- 112,382,589(+) CTCAG(G/T)TATGT intron-variant
rs1000821129 -- 112,376,663(+) GCTTT(A/T)TTCTA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105374041 Gene

Disorders for LOC105374041 Gene

No disorders were found for LOC105374041 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105374041 Gene

Publications for LOC105374041 Gene

No publications were found for LOC105374041 Gene.

Products for LOC105374041 Gene

Sources for LOC105374041 Gene

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