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Aliases for LOC105373928 Gene

Subcategory (RNA class) for LOC105373928 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105373928 Gene

  • Uncharacterized LOC105373928 3

External Ids for LOC105373928 Gene

Previous GeneCards Identifiers for LOC105373928 Gene

  • GC02U903544

Summaries for LOC105373928 Gene

GeneCards Summary for LOC105373928 Gene

LOC105373928 (Uncharacterized LOC105373928) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373928 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373928 Gene

Genomics for LOC105373928 Gene

Regulatory Elements for LOC105373928 Gene

Enhancers for LOC105373928 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H231611 2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +1.8 1751 4 HDGF PKNOX1 ARID4B SIN3A DMAP1 ZNF2 ZNF766 ZNF143 ZNF207 FOS TEX44 NMUR1 LINC00471 PTMA DIS3L2 LOC105373928 RN7SL499P
GH02H231619 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +9.5 9499 3 DDX20 BMI1 ZNF664 ZNF121 E2F1 ZFHX2 FOS EGR2 TCF7L2 SMARCE1 TEX44 RPL28P2 DIS3L2 NMUR1 LOC105373928 RN7SL499P
GH02H231639 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +30.7 30693 6 TBP RB1 KLF17 SIN3A BMI1 RFX5 RCOR1 FOS ETV6 RUNX3 RNU2-22P LINC00471 RN7SL499P LOC105373928
GH02H231627 1 Ensembl ENCODE dbSUPER 0.4 +16.3 16279 1 ZNF121 ZNF384 NR2F6 TEX44 LINC00471 RN7SL499P LOC105373928
GH02H231632 1.2 Ensembl ENCODE dbSUPER 0.3 +21.4 21433 2 ZBTB21 ZSCAN4 CEBPB MNT ATF2 ZNF629 IKZF1 CEBPA STAT3 ATF7 RNU2-22P NMUR1 RN7SL499P LOC105373928
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373928 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373928 Gene

Chromosome:
2
Start:
231,611,782 bp from pter
End:
231,613,585 bp from pter
Size:
1,804 bases
Orientation:
Plus strand

Genomic View for LOC105373928 Gene

Genes around LOC105373928 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373928 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373928 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373928 Gene

Proteins for LOC105373928 Gene

Post-translational modifications for LOC105373928 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373928 Gene

Domains & Families for LOC105373928 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373928 Gene

Function for LOC105373928 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373928 Gene

Localization for LOC105373928 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373928 Gene

Pathways & Interactions for LOC105373928 Gene

SuperPathways for LOC105373928 Gene

No Data Available

Interacting Proteins for LOC105373928 Gene

Gene Ontology (GO) - Biological Process for LOC105373928 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373928 Gene

Drugs & Compounds for LOC105373928 Gene

No Compound Related Data Available

Transcripts for LOC105373928 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373928 Gene

No ASD Table

Relevant External Links for LOC105373928 Gene

GeneLoc Exon Structure for
LOC105373928

No data available for mRNA/cDNA for LOC105373928 Gene

Expression for LOC105373928 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373928 Gene

Orthologs for LOC105373928 Gene

No data available for Orthologs and Evolution for LOC105373928 Gene

Paralogs for LOC105373928 Gene

No data available for Paralogs for LOC105373928 Gene

Variants for LOC105373928 Gene

Sequence variations from dbSNP and Humsavar for LOC105373928 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000061219 -- 231,614,041(+) GCTCT(A/G)TGCGC downstream-variant-500B
rs1000233089 -- 231,613,391(+) CCACC(C/T)CAGGG nc-transcript-variant
rs1000686778 -- 231,613,713(+) GTCCT(A/T)CACCG downstream-variant-500B
rs1001782422 -- 231,613,961(+) GCGCA(C/T)GTGCG downstream-variant-500B
rs1001866627 -- 231,610,162(+) AACCT(C/T)GGCTC upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373928 Gene

Disorders for LOC105373928 Gene

No disorders were found for LOC105373928 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373928 Gene

Publications for LOC105373928 Gene

No publications were found for LOC105373928 Gene.

Products for LOC105373928 Gene

Sources for LOC105373928 Gene

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