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Aliases for LOC105373920 Gene

Subcategory (RNA class) for LOC105373920 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105373920 Gene

  • Uncharacterized LOC105373920 3

External Ids for LOC105373920 Gene

Previous GeneCards Identifiers for LOC105373920 Gene

  • GC02U903417

Summaries for LOC105373920 Gene

GeneCards Summary for LOC105373920 Gene

LOC105373920 (Uncharacterized LOC105373920) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373920 Gene

Genomics for LOC105373920 Gene

Regulatory Elements for LOC105373920 Gene

Enhancers for LOC105373920 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G228687 0.7 ENCODE 0.7 -0.9 -920 1.1 CTCF FOXA2 HLF CEBPB MAX CEBPG ZNF644 RAD21 FOXA1 ATF4 SPHKAP LOC105373920 ENSG00000228226
GH02G228689 0.5 ENCODE 0.7 -0.1 -68 0.2 CTCF SMARCA4 RAD21 ENSG00000228226 LOC105373920
GH02G228700 0.2 ENCODE 0.4 +11.4 11430 0.8 LOC105373920 LOC105373919
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373920 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373920 Gene

Chromosome:
2
Start:
228,689,337 bp from pter
End:
228,716,684 bp from pter
Size:
27,348 bases
Orientation:
Plus strand

Genomic View for LOC105373920 Gene

Genes around LOC105373920 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373920 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373920 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373920 Gene

Proteins for LOC105373920 Gene

Post-translational modifications for LOC105373920 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373920 Gene

Domains & Families for LOC105373920 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373920 Gene

Function for LOC105373920 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373920 Gene

Localization for LOC105373920 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105373920 Gene

Pathways & Interactions for LOC105373920 Gene

SuperPathways for LOC105373920 Gene

No Data Available

Interacting Proteins for LOC105373920 Gene

Gene Ontology (GO) - Biological Process for LOC105373920 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373920 Gene

Drugs & Compounds for LOC105373920 Gene

No Compound Related Data Available

Transcripts for LOC105373920 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373920 Gene

No ASD Table

Relevant External Links for LOC105373920 Gene

GeneLoc Exon Structure for
LOC105373920

No data available for mRNA/cDNA for LOC105373920 Gene

Expression for LOC105373920 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373920 Gene

Orthologs for LOC105373920 Gene

No data available for Orthologs and Evolution for LOC105373920 Gene

Paralogs for LOC105373920 Gene

No data available for Paralogs for LOC105373920 Gene

Variants for LOC105373920 Gene

Sequence variations from dbSNP and Humsavar for LOC105373920 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000105565 -- 228,696,081(+) ACCTG(A/C/G)CAAAA intron-variant
rs1000213013 -- 228,714,535(+) TTTTT(-/TCTC)TCTTT intron-variant
rs1000458495 -- 228,701,125(+) TCCTT(C/T)TTACC intron-variant
rs1000559559 -- 228,695,618(+) TAGGG(C/T)TTCTG intron-variant
rs1000655560 -- 228,707,174(+) ATCTC(A/G)GCTCA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373920 Gene

Disorders for LOC105373920 Gene

No disorders were found for LOC105373920 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373920 Gene

Publications for LOC105373920 Gene

No publications were found for LOC105373920 Gene.

Products for LOC105373920 Gene

Sources for LOC105373920 Gene

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