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Aliases for LOC105373915 Gene

Subcategory (RNA class) for LOC105373915 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105373915 Gene

  • Uncharacterized LOC105373915 3

External Ids for LOC105373915 Gene

Previous GeneCards Identifiers for LOC105373915 Gene

  • GC02U903333

Summaries for LOC105373915 Gene

GeneCards Summary for LOC105373915 Gene

LOC105373915 (Uncharacterized LOC105373915) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373915 Gene

Genomics for LOC105373915 Gene

Regulatory Elements for LOC105373915 Gene

Enhancers for LOC105373915 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G226423 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +40.0 40014 7.3 HNRNPUL1 FOXA2 RAD21 RARA YY1 GATA2 FOS ETV6 CREM MIXL1 IRS1 LOC105373915 GC02M226320
GH02G226474 1.2 Ensembl ENCODE 0.4 -11.1 -11097 7.5 FOXA2 MLX ARID4B DMAP1 ZNF48 YY1 FOS SP5 MXD4 MIER2 IRS1 LOC105373915 GC02P226528
GH02G226443 1.4 Ensembl ENCODE dbSUPER 0.3 +20.6 20596 6.1 TBP ELF3 PKNOX1 FOXA2 ARID4B DMAP1 RAD21 YY1 FOS CREM LOC105373915 GC02M226320
GH02G226482 1 Ensembl ENCODE 0.4 -17.0 -16985 3.0 CTCF FOXA2 TEAD1 HLF ZSCAN4 TEAD4 CEBPB CEBPG RBBP5 CHD7 LOC105373915 GC02P226528
GH02G226410 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +55.0 54986 2.3 ELF3 FOXA2 MLX ARID4B RAD21 DNMT3B THRB RARA GATA4 FOS IRS1 LOC105373915 GC02M226320
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373915 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373915 Gene

Chromosome:
2
Start:
226,454,782 bp from pter
End:
226,466,774 bp from pter
Size:
11,993 bases
Orientation:
Minus strand

Genomic View for LOC105373915 Gene

Genes around LOC105373915 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373915 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373915 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373915 Gene

Proteins for LOC105373915 Gene

Post-translational modifications for LOC105373915 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373915 Gene

Domains & Families for LOC105373915 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373915 Gene

Function for LOC105373915 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373915 Gene

Localization for LOC105373915 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105373915 Gene

Pathways & Interactions for LOC105373915 Gene

SuperPathways for LOC105373915 Gene

No Data Available

Interacting Proteins for LOC105373915 Gene

Gene Ontology (GO) - Biological Process for LOC105373915 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373915 Gene

Drugs & Compounds for LOC105373915 Gene

No Compound Related Data Available

Transcripts for LOC105373915 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373915 Gene

No ASD Table

Relevant External Links for LOC105373915 Gene

GeneLoc Exon Structure for
LOC105373915

No data available for mRNA/cDNA for LOC105373915 Gene

Expression for LOC105373915 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373915 Gene

Orthologs for LOC105373915 Gene

No data available for Orthologs and Evolution for LOC105373915 Gene

Paralogs for LOC105373915 Gene

No data available for Paralogs for LOC105373915 Gene

Variants for LOC105373915 Gene

Sequence variations from dbSNP and Humsavar for LOC105373915 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000117782 -- 226,461,370(+) TTGCA(A/G)TGAGC intron-variant
rs1000140733 -- 226,464,679(+) CCACC(A/C)TCAGA intron-variant
rs1000423903 -- 226,464,923(+) TTTAG(A/T)TTAAA nc-transcript-variant
rs1000474137 -- 226,463,344(+) GACCA(C/T)ACCAA intron-variant
rs1000479107 -- 226,462,591(+) ATAAG(-/GAAA)TAAAT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373915 Gene

Disorders for LOC105373915 Gene

No disorders were found for LOC105373915 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373915 Gene

Publications for LOC105373915 Gene

No publications were found for LOC105373915 Gene.

Products for LOC105373915 Gene

Sources for LOC105373915 Gene

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