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Aliases for LOC105373904 Gene

Subcategory (RNA class) for LOC105373904 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373904 Gene

  • Uncharacterized LOC105373904 3
  • AC097461.4 5

External Ids for LOC105373904 Gene

Previous GeneCards Identifiers for LOC105373904 Gene

  • GC02U903421

Summaries for LOC105373904 Gene

GeneCards Summary for LOC105373904 Gene

LOC105373904 (Uncharacterized LOC105373904) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373904 Gene

Genomics for LOC105373904 Gene

Regulatory Elements for LOC105373904 Gene

Enhancers for LOC105373904 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G222805 1.5 FANTOM5 Ensembl ENCODE 10.3 +114.9 114852 2.0 ATF1 CREB3L1 ZFP64 ARID4B ZNF48 ELK1 KLF13 ZNF592 KAT8 ATF4 ACSL3 ENSG00000203531 LOC105373904 LOC105373903
GH02G222958 1.4 FANTOM5 Ensembl ENCODE 10.7 -38.5 -38515 2.1 CTCF JUN RAD21 GATA3 HSF1 SMC3 RCOR1 FOS RELB IKZF2 LOC105373904 ACSL3 LOC100419511 GC02P223042
GH02G222707 1.3 Ensembl ENCODE 11 +212.5 212508 3.3 HDGF PKNOX1 FOXA2 MLX CREB3L1 ARID4B SIN3A DMAP1 ZNF2 SLC30A9 ACSL3 MOGAT1 LOC105373904 FARSB RPL31P17 ENSG00000203531
GH02G223050 1.4 FANTOM5 ENCODE dbSUPER 10.1 -133.2 -133245 7.6 PKNOX1 BMI1 YY1 TCF12 GATA2 SCRT2 FOS KLF13 ZNF592 NR2F2 LOC105373904 ACSL3 KCNE4 MRPL44 GC02M223058
GH02G222843 1.3 FANTOM5 Ensembl ENCODE 10.6 +76.8 76787 1.4 JUN FOSL1 ZNF316 NFE2 FOS MAFK NFE2L2 NRF1 BHLHE40 MAFG LOC105373904 ACSL3 SGPP2 LOC105373903
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373904 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373904 Gene

Chromosome:
2
Start:
222,917,339 bp from pter
End:
222,921,272 bp from pter
Size:
3,934 bases
Orientation:
Minus strand

Genomic View for LOC105373904 Gene

Genes around LOC105373904 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373904 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373904 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373904 Gene

Proteins for LOC105373904 Gene

Post-translational modifications for LOC105373904 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373904 Gene

Domains & Families for LOC105373904 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373904 Gene

Function for LOC105373904 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373904 Gene

Localization for LOC105373904 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105373904 Gene

Pathways & Interactions for LOC105373904 Gene

SuperPathways for LOC105373904 Gene

No Data Available

Interacting Proteins for LOC105373904 Gene

Gene Ontology (GO) - Biological Process for LOC105373904 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373904 Gene

Drugs & Compounds for LOC105373904 Gene

No Compound Related Data Available

Transcripts for LOC105373904 Gene

mRNA/cDNA for LOC105373904 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373904 Gene

No ASD Table

Relevant External Links for LOC105373904 Gene

GeneLoc Exon Structure for
LOC105373904

Expression for LOC105373904 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373904 Gene

Orthologs for LOC105373904 Gene

Evolution for LOC105373904 Gene

ENSEMBL:
Gene Tree for LOC105373904 (if available)
TreeFam:
Gene Tree for LOC105373904 (if available)

No data available for Orthologs for LOC105373904 Gene

Paralogs for LOC105373904 Gene

No data available for Paralogs for LOC105373904 Gene

Variants for LOC105373904 Gene

Sequence variations from dbSNP and Humsavar for LOC105373904 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000329082 -- 222,917,129(+) TCTGT(C/T)GCCAG intron-variant, downstream-variant-500B
rs1002028954 -- 222,917,646(+) ACATA(A/C)ACCGT intron-variant, nc-transcript-variant
rs1002066286 -- 222,917,972(+) GATTC(A/G)TCTCC intron-variant
rs1003030436 -- 222,919,602(+) TCTTC(C/G)CTTTC intron-variant, nc-transcript-variant
rs1003624296 -- 222,920,833(+) CCACA(C/G)TCCTT intron-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373904 Gene

Disorders for LOC105373904 Gene

No disorders were found for LOC105373904 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373904 Gene

Publications for LOC105373904 Gene

No publications were found for LOC105373904 Gene.

Products for LOC105373904 Gene

Sources for LOC105373904 Gene

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