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Aliases for LOC105373904 Gene

Subcategory (RNA class) for LOC105373904 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373904 Gene

  • Uncharacterized LOC105373904 3
  • AC013476.1 5

External Ids for LOC105373904 Gene

Previous GeneCards Identifiers for LOC105373904 Gene

  • GC02U903421

Summaries for LOC105373904 Gene

GeneCards Summary for LOC105373904 Gene

LOC105373904 (Uncharacterized LOC105373904) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373904 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373904 Gene

Genomics for LOC105373904 Gene

GeneHancer (GH) Regulatory Elements for LOC105373904 Gene

Promoters and enhancers for LOC105373904 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I222919 Enhancer 1 Ensembl ENCODE 550.8 +1.2 1237 2 HDAC1 PKNOX1 ATF1 ARNT TCF12 ZNF366 FOS ATF7 ZEB2 ZNF585B LOC105373904 ACSL3 ATG12P2
GH02I223050 Promoter/Enhancer 2.2 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.1 -133.2 -133245 7.6 MEIS2 PKNOX1 USF1 TAF1 NFATC3 TAL1 CEBPG BMI1 ZNF644 TCF12 KCNE4 LOC105373904 ACSL3 MRPL44 GC02M223058 GC02P223042 GC02P223043
GH02I222859 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.3 +59.7 59736 4.3 PKNOX1 FOXA2 SMAD1 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ACSL3 LOC105373904 GC02M222847
GH02I222707 Enhancer 1.3 Ensembl ENCODE 11 +212.5 212508 3.3 HDGF PKNOX1 FOXA2 MLX ARID4B SIN3A DMAP1 ZNF2 SLC30A9 E2F8 ACSL3 MOGAT1 LOC105373904 FARSB RPL31P17 ENSG00000203531
GH02I222805 Enhancer 1.3 FANTOM5 Ensembl ENCODE 10.3 +114.9 114852 2 ATF1 ZFP64 ARID4B ZNF48 ETS1 ATF7 ZNF592 KAT8 NFIL3 ATF4 ACSL3 ENSG00000203531 LOC105373904 LOC105373903
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC105373904 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105373904 Gene

Genomic Locations for LOC105373904 Gene
chr2:222,917,339-222,921,272
(GRCh38/hg38)
Size:
3,934 bases
Orientation:
Minus strand
chr2:223,782,105-223,784,081
(GRCh37/hg19)

Genomic View for LOC105373904 Gene

Genes around LOC105373904 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373904 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373904 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373904 Gene

Proteins for LOC105373904 Gene

Post-translational modifications for LOC105373904 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373904 Gene

Domains & Families for LOC105373904 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373904 Gene

Function for LOC105373904 Gene

Phenotypes From GWAS Catalog for LOC105373904 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373904 Gene

Localization for LOC105373904 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373904 Gene

Pathways & Interactions for LOC105373904 Gene

SuperPathways for LOC105373904 Gene

No Data Available

Interacting Proteins for LOC105373904 Gene

Gene Ontology (GO) - Biological Process for LOC105373904 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373904 Gene

Drugs & Compounds for LOC105373904 Gene

No Compound Related Data Available

Transcripts for LOC105373904 Gene

mRNA/cDNA for LOC105373904 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373904 Gene

No ASD Table

Relevant External Links for LOC105373904 Gene

GeneLoc Exon Structure for
LOC105373904

Expression for LOC105373904 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373904 Gene

Orthologs for LOC105373904 Gene

Evolution for LOC105373904 Gene

ENSEMBL:
Gene Tree for LOC105373904 (if available)
TreeFam:
Gene Tree for LOC105373904 (if available)

No data available for Orthologs for LOC105373904 Gene

Paralogs for LOC105373904 Gene

No data available for Paralogs for LOC105373904 Gene

Variants for LOC105373904 Gene

Sequence variations from dbSNP and Humsavar for LOC105373904 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs1000329082 -- 222,917,129(-) C/T downstream_transcript_variant
rs1002028954 -- 222,917,646(-) C/A non_coding_transcript_variant
rs1002066286 -- 222,917,972(-) A/G intron_variant
rs1003030436 -- 222,919,602(-) C/G non_coding_transcript_variant
rs1003624296 -- 222,920,833(-) C/G upstream_transcript_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC105373904 Gene

Disorders for LOC105373904 Gene

No disorders were found for LOC105373904 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373904 Gene

Publications for LOC105373904 Gene

No publications were found for LOC105373904 Gene.

Products for LOC105373904 Gene

Sources for LOC105373904 Gene

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