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Aliases for LOC105373883 Gene

Subcategory (RNA class) for LOC105373883 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105373883 Gene

  • Uncharacterized LOC105373883 3

External Ids for LOC105373883 Gene

Previous GeneCards Identifiers for LOC105373883 Gene

  • GC02U903164

Summaries for LOC105373883 Gene

GeneCards Summary for LOC105373883 Gene

LOC105373883 (Uncharacterized LOC105373883) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373883 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373883 Gene

Genomics for LOC105373883 Gene

Regulatory Elements for LOC105373883 Gene

Enhancers for LOC105373883 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H219368 1.2 Ensembl ENCODE 0.7 -0.9 -916 2 FOXA2 FEZF1 ZNF2 GATA2 ZNF416 KLF7 YY2 REST TSHZ1 ZNF488 ZNF142 RNF25 STK36 CNOT9 ENSG00000269068 STK11IP ENSG00000268896 ANKZF1 OBSL1 GLB1L
GH02H219386 1 ENCODE 0.4 -19.6 -19570 3 ATF1 ARID4B SIN3A DMAP1 YY1 GLIS2 ZNF143 ZNF207 ATF7 RUNX3 DNPEP NHEJ1 ANKZF1 DES SLC23A3 GMPPA BCS1L CNOT9 USP37 GLB1L
GH02H219362 0.8 ENCODE 0.4 +5.7 5732 0 PAX8 BATF ZIC2 ZFHX2 GLIS2 ZNF366 POLR2A EED FOS ZNF600 PTPRN RESP18 MIR153-1 TUBA4A DNAJB2 TUBA4B SPEG ENSG00000232789 LOC105373883
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373883 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373883 Gene

Chromosome:
2
Start:
219,362,506 bp from pter
End:
219,368,390 bp from pter
Size:
5,885 bases
Orientation:
Minus strand

Genomic View for LOC105373883 Gene

Genes around LOC105373883 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373883 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373883 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373883 Gene

Proteins for LOC105373883 Gene

Post-translational modifications for LOC105373883 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373883 Gene

Domains & Families for LOC105373883 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373883 Gene

Function for LOC105373883 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373883 Gene

Localization for LOC105373883 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373883 Gene

Pathways & Interactions for LOC105373883 Gene

SuperPathways for LOC105373883 Gene

No Data Available

Interacting Proteins for LOC105373883 Gene

Gene Ontology (GO) - Biological Process for LOC105373883 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373883 Gene

Drugs & Compounds for LOC105373883 Gene

No Compound Related Data Available

Transcripts for LOC105373883 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373883 Gene

No ASD Table

Relevant External Links for LOC105373883 Gene

GeneLoc Exon Structure for
LOC105373883

No data available for mRNA/cDNA for LOC105373883 Gene

Expression for LOC105373883 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373883 Gene

Orthologs for LOC105373883 Gene

No data available for Orthologs and Evolution for LOC105373883 Gene

Paralogs for LOC105373883 Gene

No data available for Paralogs for LOC105373883 Gene

Variants for LOC105373883 Gene

Sequence variations from dbSNP and Humsavar for LOC105373883 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000563139 -- 219,369,226(+) CATAG(C/G)ATAAC upstream-variant-2KB
rs1000741009 -- 219,362,119(+) TCTAT(-/G)GGGAG downstream-variant-500B
rs1000898765 -- 219,362,458(+) AGCAA(A/G)GAATA downstream-variant-500B
rs1000900710 -- 219,369,027(+) TTCCA(A/G)CTGCC upstream-variant-2KB
rs1000952617 -- 219,368,712(+) TAACT(C/T)AGTTT upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373883 Gene

Disorders for LOC105373883 Gene

No disorders were found for LOC105373883 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373883 Gene

Publications for LOC105373883 Gene

No publications were found for LOC105373883 Gene.

Products for LOC105373883 Gene

Sources for LOC105373883 Gene

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