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Aliases for LOC105373780 Gene

Aliases for LOC105373780 Gene

  • Proline-Rich Protein 18-Like 3
  • AC096667.1 5

External Ids for LOC105373780 Gene

Previous GeneCards Identifiers for LOC105373780 Gene

  • GC02U903148

Summaries for LOC105373780 Gene

GeneCards Summary for LOC105373780 Gene

LOC105373780 (Proline-Rich Protein 18-Like) is a Protein Coding gene.

Additional gene information for LOC105373780 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373780 Gene

Genomics for LOC105373780 Gene

Regulatory Elements for LOC105373780 Gene

Enhancers for LOC105373780 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H184596 0.7 ENCODE 0.7 +0.4 371 4.1 CTCF TBP MXI1 FOXA2 SUZ12 MAX RAD21 E2F1 ZFHX2 POLR2A LOC105373780 ZNF804A
GH02H184637 0.4 ENCODE 0.3 -39.2 -39235 1 HNF4A ZNF804A LOC105373780 RPL23AP33
GH02H184686 0.2 ENCODE 0.2 -87.6 -87552 0.3 LOC105373780 RPL23AP33
GH02H184731 0.3 FANTOM5 0.1 -132.4 -132412 0.3 ZNF804A LOC105373780 RPL23AP33
GH02H184766 0.2 Ensembl 0.1 -167.1 -167093 0.2 RPL23AP33 LOC105373780
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373780 on UCSC Golden Path with GeneCards custom track

Promoters for LOC105373780 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000295144 908 2601 TBP CTCF MXI1 FOXA2 L3MBTL2 SUZ12 MAX REST RAD21 E2F1

Genomic Locations for LOC105373780 Gene

Genomic Locations for LOC105373780 Gene
chr2:184,593,577-184,599,008
(GRCh38/hg38)
Size:
5,432 bases
Orientation:
Minus strand

Genomic View for LOC105373780 Gene

Genes around LOC105373780 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373780 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373780 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373780 Gene

Proteins for LOC105373780 Gene

Post-translational modifications for LOC105373780 Gene

No Post-translational modifications

Other Protein References for LOC105373780 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105373780 Gene

Domains & Families for LOC105373780 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373780 Gene

Function for LOC105373780 Gene

Phenotypes From GWAS Catalog for LOC105373780 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373780 Gene

Localization for LOC105373780 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373780 Gene

Pathways & Interactions for LOC105373780 Gene

SuperPathways for LOC105373780 Gene

No Data Available

Interacting Proteins for LOC105373780 Gene

Gene Ontology (GO) - Biological Process for LOC105373780 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373780 Gene

Drugs & Compounds for LOC105373780 Gene

No Compound Related Data Available

Transcripts for LOC105373780 Gene

mRNA/cDNA for LOC105373780 Gene

(2) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373780 Gene

No ASD Table

Relevant External Links for LOC105373780 Gene

GeneLoc Exon Structure for
LOC105373780

Expression for LOC105373780 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373780 Gene

Orthologs for LOC105373780 Gene

Evolution for LOC105373780 Gene

ENSEMBL:
Gene Tree for LOC105373780 (if available)
TreeFam:
Gene Tree for LOC105373780 (if available)

No data available for Orthologs for LOC105373780 Gene

Paralogs for LOC105373780 Gene

No data available for Paralogs for LOC105373780 Gene

Variants for LOC105373780 Gene

Sequence variations from dbSNP and Humsavar for LOC105373780 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000577250 -- 184,598,513(+) CTCAT(G/T)CCTGC reference, missense, utr-variant-5-prime
rs1000656504 -- 184,596,245(+) ATACA(C/T)TGATA utr-variant-3-prime
rs1000687652 -- 184,596,595(+) AAGTT(C/T)ACAAA intron-variant, upstream-variant-2KB
rs1001177398 -- 184,599,991(+) GCTTA(C/G)TACTG intron-variant, upstream-variant-2KB
rs1001326401 -- 184,593,542(+) GCTGT(A/G)ATTTT downstream-variant-500B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373780 Gene

Disorders for LOC105373780 Gene

No disorders were found for LOC105373780 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373780 Gene

Publications for LOC105373780 Gene

No publications were found for LOC105373780 Gene.

Products for LOC105373780 Gene

Sources for LOC105373780 Gene

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