Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105373496 Gene

Subcategory (RNA class) for LOC105373496 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373496 Gene

  • Uncharacterized LOC105373496 3
  • AC013270.1 5

External Ids for LOC105373496 Gene

Previous GeneCards Identifiers for LOC105373496 Gene

  • GC02U903459

Summaries for LOC105373496 Gene

GeneCards Summary for LOC105373496 Gene

LOC105373496 (Uncharacterized LOC105373496) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373496 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373496 Gene

Genomics for LOC105373496 Gene

Regulatory Elements for LOC105373496 Gene

Enhancers for LOC105373496 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H096412 1.2 Ensembl ENCODE 11.2 +119.0 119001 1 HDAC1 ELF3 ATF1 ARID4B SIN3A BMI1 YY1 ZNF766 GATA2 CAVIN1 KANSL3 SNRNP200 ITPRIPL1 ANKRD36 LMAN2L CNNM3 LOC105373496 ARID5A SEMA4C CIAO1
GH02H096406 1.2 Ensembl ENCODE 11.2 +123.1 123084 5 FOXA2 ZFP64 ARID4B ZNF2 ZNF121 GLIS2 ZNF143 YY2 REST SSRP1 SNRNP200 ITPRIPL1 GPAT2P1 ANKRD36 CNNM3 KANSL3 ARID5A LOC105373496 CIAO1 ENSG00000230747
GH02H096352 1.1 Ensembl ENCODE 10.7 +178.8 178803 2 HDAC1 HDGF PKNOX1 ATF1 NFIB GATA2 EGR1 ZNF366 ATF7 CREM CIAO1 ITPRIPL1 ENSG00000230747 LOC105373496 ASTL NCAPH PIR33612
GH02H096615 1 Ensembl ENCODE 11.1 -85.6 -85600 3 ELF3 KLF1 FOXA2 SAP130 KLF17 MAX CEBPG RAD21 RARA YY1 CNNM3 ARID5A FER1L5 KANSL3 LOC105373496 CNNM4 LMAN2L ITPRIPL1 SNRNP200 GC02P096595
GH02H096608 0.7 ENCODE 11.1 -76.5 -76492 1 TFAP4 SAP130 SOX6 NR2F1 MAFG RAD21 RARA ZNF316 IKZF1 HNF4A ARID5A LOC105373496 CNNM3 KANSL3 GC02P096595 FER1L5
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373496 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373496 Gene

Chromosome:
2
Start:
96,527,940 bp from pter
End:
96,532,306 bp from pter
Size:
4,367 bases
Orientation:
Minus strand

Genomic View for LOC105373496 Gene

Genes around LOC105373496 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373496 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373496 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373496 Gene

Proteins for LOC105373496 Gene

Post-translational modifications for LOC105373496 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373496 Gene

Domains & Families for LOC105373496 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373496 Gene

Function for LOC105373496 Gene

Phenotypes From GWAS Catalog for LOC105373496 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373496 Gene

Localization for LOC105373496 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373496 Gene

Pathways & Interactions for LOC105373496 Gene

SuperPathways for LOC105373496 Gene

No Data Available

Interacting Proteins for LOC105373496 Gene

Gene Ontology (GO) - Biological Process for LOC105373496 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373496 Gene

Drugs & Compounds for LOC105373496 Gene

No Compound Related Data Available

Transcripts for LOC105373496 Gene

mRNA/cDNA for LOC105373496 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373496 Gene

No ASD Table

Relevant External Links for LOC105373496 Gene

GeneLoc Exon Structure for
LOC105373496

Expression for LOC105373496 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373496 Gene

Orthologs for LOC105373496 Gene

Evolution for LOC105373496 Gene

ENSEMBL:
Gene Tree for LOC105373496 (if available)
TreeFam:
Gene Tree for LOC105373496 (if available)

No data available for Orthologs for LOC105373496 Gene

Paralogs for LOC105373496 Gene

No data available for Paralogs for LOC105373496 Gene

Variants for LOC105373496 Gene

Sequence variations from dbSNP and Humsavar for LOC105373496 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000312640 -- 96,528,903(+) GGATT(C/T)AGCAG intron-variant
rs1000343819 -- 96,528,552(+) AGAAA(A/T)AGCTC intron-variant
rs1001236675 -- 96,528,083(+) TCCGA(A/G)GTCCC nc-transcript-variant
rs1001288989 -- 96,527,777(+) CGCAG(G/T)GGTCG downstream-variant-500B
rs1002148643 -- 96,534,077(+) GAATG(A/G)TCCCT upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373496 Gene

Disorders for LOC105373496 Gene

Relevant External Links for LOC105373496

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105373496

No disorders were found for LOC105373496 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105373496 Gene

Publications for LOC105373496 Gene

No publications were found for LOC105373496 Gene.

Products for LOC105373496 Gene

Sources for LOC105373496 Gene

Content
Loading form....