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Aliases for LOC105373387 Gene

Subcategory (RNA class) for LOC105373387 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373387 Gene

  • Uncharacterized LOC105373387 3
  • AF277315.13 5

External Ids for LOC105373387 Gene

Previous GeneCards Identifiers for LOC105373387 Gene

  • GC0XU902194

Summaries for LOC105373387 Gene

GeneCards Summary for LOC105373387 Gene

LOC105373387 (Uncharacterized LOC105373387) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373387 Gene

Genomics for LOC105373387 Gene

Regulatory Elements for LOC105373387 Gene

Enhancers for LOC105373387 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF153965 1.5 FANTOM5 ENCODE 16.2 -683.2 -683173 10.0 HDGF PKNOX1 CREB3L1 WRNIP1 ZFP64 SIN3A FEZF1 DMAP1 ZNF2 YY1 TMEM187 LOC105373387 MAGEA1 ENSG00000234200 SNORA70 EMD HCFC1 SNORA56 FAM3A ABCD1
GH0XF154246 0.8 Ensembl 16.2 -405.8 -405788 3.4 ZNF335 GLIS2 EGR2 ZNF680 YY2 ZNF488 ZNF645 ZFP41 ZNF658 MYNN HCFC1 SNORA70 LOC105373387 EMD ENSG00000261773 LOC105373383 PLXNA3 FAM3A LOC102030688 OPN1MW2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373387 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373387 Gene

Chromosome:
X
Start:
154,653,688 bp from pter
End:
154,655,374 bp from pter
Size:
1,687 bases
Orientation:
Plus strand

Genomic View for LOC105373387 Gene

Genes around LOC105373387 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373387 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373387 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373387 Gene

Proteins for LOC105373387 Gene

Post-translational modifications for LOC105373387 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373387 Gene

Domains & Families for LOC105373387 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373387 Gene

Function for LOC105373387 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373387 Gene

Localization for LOC105373387 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105373387 Gene

Pathways & Interactions for LOC105373387 Gene

SuperPathways for LOC105373387 Gene

No Data Available

Interacting Proteins for LOC105373387 Gene

Gene Ontology (GO) - Biological Process for LOC105373387 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373387 Gene

Transcripts for LOC105373387 Gene

mRNA/cDNA for LOC105373387 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373387 Gene

No ASD Table

Relevant External Links for LOC105373387 Gene

GeneLoc Exon Structure for
LOC105373387

Expression for LOC105373387 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for LOC105373387 Gene

Orthologs for LOC105373387 Gene

Evolution for LOC105373387 Gene

ENSEMBL:
Gene Tree for LOC105373387 (if available)
TreeFam:
Gene Tree for LOC105373387 (if available)

No data available for Orthologs for LOC105373387 Gene

Paralogs for LOC105373387 Gene

No data available for Paralogs for LOC105373387 Gene

Variants for LOC105373387 Gene

Sequence variations from dbSNP and Humsavar for LOC105373387 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs111519604 -- 154,654,319(+) TGGAC(C/T)TGAGG nc-transcript-variant, upstream-variant-2KB
rs111856137 -- 154,652,914(+) CGCTT(-/C)CCCCC intron-variant, upstream-variant-2KB
rs111939162 -- 154,653,354(+) GGCCC(C/T)GAGGC upstream-variant-2KB, reference, synonymous-codon
rs112780678 -- 154,652,295(+) ATCAC(A/C/G)TTAAA intron-variant, upstream-variant-2KB, reference, synonymous-codon, missense
rs113459988 -- 154,652,360(+) TGTAC(C/G)AGGTC intron-variant, upstream-variant-2KB, reference, missense

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373387 Gene

Disorders for LOC105373387 Gene

No disorders were found for LOC105373387 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373387 Gene

Publications for LOC105373387 Gene

No publications were found for LOC105373387 Gene.

Products for LOC105373387 Gene

Sources for LOC105373387 Gene

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