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Aliases for LOC105373386 Gene

Subcategory (RNA class) for LOC105373386 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373386 Gene

  • Uncharacterized LOC105373386 3
  • XX-FW83128A1.2 3
  • AC245140.1 5

External Ids for LOC105373386 Gene

Previous GeneCards Identifiers for LOC105373386 Gene

  • GC0XU902153

Summaries for LOC105373386 Gene

GeneCards Summary for LOC105373386 Gene

LOC105373386 (Uncharacterized LOC105373386) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373386 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373386 Gene

Genomics for LOC105373386 Gene

Regulatory Elements for LOC105373386 Gene

Enhancers for LOC105373386 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH154340 1 Ensembl ENCODE dbSUPER 0.7 -0.2 -159 4 ZFP69B PKNOX1 ZNF692 SP2 KLF8 LOC105373386 GC0XM154351 GC0XM154352
GH0XH154346 1.2 Ensembl ENCODE dbSUPER 0.4 -6.7 -6744 6 BCOR GTF2F1 ESRRA KLF1 NFIB HIC1 POLR2A ZNF600 PRDM10 SMARCA5 PLXNA3 FAM50A FAM3A GC0XM154352 GC0XM154351 LOC105373386
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373386 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373386 Gene

Chromosome:
X
Start:
154,333,960 bp from pter
End:
154,342,742 bp from pter
Size:
8,783 bases
Orientation:
Minus strand

Genomic View for LOC105373386 Gene

Genes around LOC105373386 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373386 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373386 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373386 Gene

Proteins for LOC105373386 Gene

Post-translational modifications for LOC105373386 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373386 Gene

Domains & Families for LOC105373386 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373386 Gene

Function for LOC105373386 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373386 Gene

Localization for LOC105373386 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373386 Gene

Pathways & Interactions for LOC105373386 Gene

SuperPathways for LOC105373386 Gene

No Data Available

Interacting Proteins for LOC105373386 Gene

Gene Ontology (GO) - Biological Process for LOC105373386 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373386 Gene

Drugs & Compounds for LOC105373386 Gene

No Compound Related Data Available

Transcripts for LOC105373386 Gene

mRNA/cDNA for LOC105373386 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373386 Gene

No ASD Table

Relevant External Links for LOC105373386 Gene

GeneLoc Exon Structure for
LOC105373386

Expression for LOC105373386 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373386 Gene

Orthologs for LOC105373386 Gene

Evolution for LOC105373386 Gene

ENSEMBL:
Gene Tree for LOC105373386 (if available)
TreeFam:
Gene Tree for LOC105373386 (if available)

No data available for Orthologs for LOC105373386 Gene

Paralogs for LOC105373386 Gene

No data available for Paralogs for LOC105373386 Gene

Variants for LOC105373386 Gene

Sequence variations from dbSNP and Humsavar for LOC105373386 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs398122812 Pathogenic 154,348,897(-) AAATG(A/G)GGGGA upstream-variant-2KB, reference, stop-gained
rs797044496 Pathogenic 154,349,037(-) CCTCA(C/G)GCAAC upstream-variant-2KB, splice-acceptor-variant
rs863223636 Pathogenic 154,348,851(-) GTGCC(-/CT)GAGTC upstream-variant-2KB, reference, frameshift-variant
rs201663443 Likely benign 154,349,354(+) CCGGG(C/T)TGCCC intron-variant, upstream-variant-2KB
rs886039087 Likely benign 154,349,800(-) ATTGA(C/T)GGCCC upstream-variant-2KB, reference, synonymous-codon

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373386 Gene

Disorders for LOC105373386 Gene

No disorders were found for LOC105373386 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373386 Gene

Publications for LOC105373386 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 60

Products for LOC105373386 Gene

Sources for LOC105373386 Gene

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