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Aliases for LOC105373383 Gene

Subcategory (RNA class) for LOC105373383 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373383 Gene

  • Uncharacterized LOC105373383 3
  • AF274858.3 5

External Ids for LOC105373383 Gene

Previous GeneCards Identifiers for LOC105373383 Gene

  • GC0XU902064

Summaries for LOC105373383 Gene

GeneCards Summary for LOC105373383 Gene

LOC105373383 (Uncharacterized LOC105373383) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373383 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373383 Gene

Genomics for LOC105373383 Gene

Regulatory Elements for LOC105373383 Gene

Enhancers for LOC105373383 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH153900 1.6 FANTOM5 Ensembl ENCODE 23.3 +303.2 303165 4 HDGF GLI4 TCF12 ZNF766 GLIS2 GATA2 ZNF143 FOS REST ZNF658 SNORA70 HCFC1 EMD DKC1 TMEM187 SNORA56 LOC105373383 SLC10A3 PLXNA3 PLXNB3
GH0XH154595 0.9 Ensembl ENCODE 15.2 +997.2 997237 1 CTCF MAX CEBPB FEZF1 SALL2 RAD21 EP300 JUND SMC3 POU5F1 LOC105373383 GDI1 GAB3 PDZD4 L1CAM FAM3A ENSG00000232155 CTAG1A
GH0XH153383 0.8 FANTOM5 9.9 -215.9 -215934 0 ZNF493 ZNF140 ZNF266 ZNF155 ZNF791 ZNF157 ADNP ZNF621 MNT ZNF645 HCFC1 EMD MAGEA1 ENSG00000234200 MAGEA6 MAGEA2B MAGEA3 LOC105373383 TMEM187 MECP2
GH0XH153598 0.9 ENCODE 7.7 +0.3 284 2 SIN3A ZNF121 GLIS2 ZNF143 SP3 REST ZNF610 ZSCAN16 GLIS1 CTCF KRT18P48 LOC105373383 CETN2 CCNQ
GH0XH153591 0.4 ENCODE 5.4 -7.7 -7743 0 EBF1 LOC105373383 GC0XP153580
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373383 on UCSC Golden Path with GeneCards custom track

Promoters for LOC105373383 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000249566 -40 2201 RB1 ZNF76 KLF17 SIN3A ZBTB40 THRB ZNF121 ZNF23 GLIS2 EGR1

Genomic Location for LOC105373383 Gene

Chromosome:
X
Start:
153,599,340 bp from pter
End:
153,604,353 bp from pter
Size:
5,014 bases
Orientation:
Plus strand

Genomic View for LOC105373383 Gene

Genes around LOC105373383 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373383 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373383 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373383 Gene

Proteins for LOC105373383 Gene

Post-translational modifications for LOC105373383 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373383 Gene

Domains & Families for LOC105373383 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373383 Gene

Function for LOC105373383 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373383 Gene

Localization for LOC105373383 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373383 Gene

Pathways & Interactions for LOC105373383 Gene

SuperPathways for LOC105373383 Gene

No Data Available

Interacting Proteins for LOC105373383 Gene

Gene Ontology (GO) - Biological Process for LOC105373383 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373383 Gene

Drugs & Compounds for LOC105373383 Gene

No Compound Related Data Available

Transcripts for LOC105373383 Gene

mRNA/cDNA for LOC105373383 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373383 Gene

No ASD Table

Relevant External Links for LOC105373383 Gene

GeneLoc Exon Structure for
LOC105373383

Expression for LOC105373383 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373383 Gene

Orthologs for LOC105373383 Gene

Evolution for LOC105373383 Gene

ENSEMBL:
Gene Tree for LOC105373383 (if available)
TreeFam:
Gene Tree for LOC105373383 (if available)

No data available for Orthologs for LOC105373383 Gene

Paralogs for LOC105373383 Gene

No data available for Paralogs for LOC105373383 Gene

Variants for LOC105373383 Gene

Sequence variations from dbSNP and Humsavar for LOC105373383 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1001760172 -- 153,598,714(+) TCCGC(C/G)TCGCT intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1004198215 -- 153,597,367(+) GATCA(A/T)CGTCT intron-variant, upstream-variant-2KB
rs1007164853 -- 153,599,644(+) GTGTC(C/T)GAGGT nc-transcript-variant, upstream-variant-2KB
rs1008745066 -- 153,597,885(+) TACAC(A/G)GACCC intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1011733849 -- 153,598,251(+) TCTCT(A/G)CTAAA intron-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373383 Gene

Disorders for LOC105373383 Gene

Relevant External Links for LOC105373383

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105373383

No disorders were found for LOC105373383 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105373383 Gene

Publications for LOC105373383 Gene

No publications were found for LOC105373383 Gene.

Products for LOC105373383 Gene

Sources for LOC105373383 Gene

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