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Aliases for LOC105373098 Gene

Subcategory (RNA class) for LOC105373098 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373098 Gene

  • Uncharacterized LOC105373098 3
  • CTA-384D8.35 3
  • U62317.2 5

External Ids for LOC105373098 Gene

Previous GeneCards Identifiers for LOC105373098 Gene

  • GC22U901061

Summaries for LOC105373098 Gene

GeneCards Summary for LOC105373098 Gene

LOC105373098 (Uncharacterized LOC105373098) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373098 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373098 Gene

Genomics for LOC105373098 Gene

Regulatory Elements for LOC105373098 Gene

Enhancers for LOC105373098 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H050536 2.1 FANTOM5 Ensembl ENCODE dbSUPER 10.2 +0.6 596 13 HDGF FOXA2 PKNOX1 ARNT ARID4B SIN3A YY1 SLC30A9 ZNF766 ZNF143 TYMP ODF3B ENSG00000272821 CPT1B SCO2 CHKB SYCE3 LOC105373098 ARSA TUBGCP6
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373098 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373098 Gene

Chromosome:
22
Start:
50,542,303 bp from pter
End:
50,544,261 bp from pter
Size:
1,959 bases
Orientation:
Minus strand

Genomic View for LOC105373098 Gene

Genes around LOC105373098 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373098 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373098 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373098 Gene

Proteins for LOC105373098 Gene

Post-translational modifications for LOC105373098 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373098 Gene

Domains & Families for LOC105373098 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373098 Gene

Function for LOC105373098 Gene

Phenotypes From GWAS Catalog for LOC105373098 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373098 Gene

Localization for LOC105373098 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373098 Gene

Pathways & Interactions for LOC105373098 Gene

SuperPathways for LOC105373098 Gene

No Data Available

Interacting Proteins for LOC105373098 Gene

Gene Ontology (GO) - Biological Process for LOC105373098 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373098 Gene

Drugs & Compounds for LOC105373098 Gene

No Compound Related Data Available

Transcripts for LOC105373098 Gene

mRNA/cDNA for LOC105373098 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373098 Gene

No ASD Table

Relevant External Links for LOC105373098 Gene

GeneLoc Exon Structure for
LOC105373098

Expression for LOC105373098 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373098 Gene

Orthologs for LOC105373098 Gene

Evolution for LOC105373098 Gene

ENSEMBL:
Gene Tree for LOC105373098 (if available)
TreeFam:
Gene Tree for LOC105373098 (if available)

No data available for Orthologs for LOC105373098 Gene

Paralogs for LOC105373098 Gene

No data available for Paralogs for LOC105373098 Gene

Variants for LOC105373098 Gene

Sequence variations from dbSNP and Humsavar for LOC105373098 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs1000732829 -- 50,542,516(+) GAACA(C/T)GACTG intron-variant, nc-transcript-variant
rs1000989632 -- 50,545,082(+) ACCTA(C/T)ATGCC upstream-variant-2KB
rs1001340166 -- 50,544,786(+) AGTTA(A/C)CTGAG upstream-variant-2KB
rs1001724708 -- 50,546,430(+) CCCTC(A/C/G)GGGCT upstream-variant-2KB
rs1001968835 -- 50,543,203(+) ACAGG(C/T)GCCCG intron-variant, downstream-variant-500B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373098 Gene

Disorders for LOC105373098 Gene

No disorders were found for LOC105373098 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105373098 Gene

Publications for LOC105373098 Gene

No publications were found for LOC105373098 Gene.

Products for LOC105373098 Gene

Sources for LOC105373098 Gene

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