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Aliases for LOC105373021 Gene

Subcategory (RNA class) for LOC105373021 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105373021 Gene

  • Uncharacterized LOC105373021 3
  • AL049749.1 5

External Ids for LOC105373021 Gene

Previous GeneCards Identifiers for LOC105373021 Gene

  • GC22U901133

Summaries for LOC105373021 Gene

GeneCards Summary for LOC105373021 Gene

LOC105373021 (Uncharacterized LOC105373021) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105373021 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105373021 Gene

Genomics for LOC105373021 Gene

Regulatory Elements for LOC105373021 Gene

Enhancers for LOC105373021 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22H036644 0.9 ENCODE 12.6 -59.5 -59470 0 ELF3 NFIB KLF17 ZSCAN9 ZEB1 CHAMP1 ZNF766 ZSCAN5C ZNF143 RCOR1 CACNG2 LOC105373021 ENSG00000229971 PVALB ENSG00000234979 GC22P036628
GH22H036737 0.5 Ensembl ENCODE 5.7 +33.8 33783 1 LOC105373021 PIR39680 PIR38212 GC22M036764
GH22H036733 0.4 ENCODE 5.8 +30.4 30398 0 RUNX3 EZH2 ENSG00000234979 PVALB ENSG00000229971 IL2RB ENSG00000231467 TMPRSS6 LOC105373021 PIR39680 PIR38212 GC22M036764
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105373021 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105373021 Gene

Chromosome:
22
Start:
36,703,918 bp from pter
End:
36,721,472 bp from pter
Size:
17,555 bases
Orientation:
Plus strand

Genomic View for LOC105373021 Gene

Genes around LOC105373021 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105373021 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105373021 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105373021 Gene

Proteins for LOC105373021 Gene

Post-translational modifications for LOC105373021 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105373021 Gene

Domains & Families for LOC105373021 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105373021 Gene

Function for LOC105373021 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105373021 Gene

Localization for LOC105373021 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105373021 Gene

Pathways & Interactions for LOC105373021 Gene

SuperPathways for LOC105373021 Gene

No Data Available

Interacting Proteins for LOC105373021 Gene

Gene Ontology (GO) - Biological Process for LOC105373021 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105373021 Gene

Drugs & Compounds for LOC105373021 Gene

No Compound Related Data Available

Transcripts for LOC105373021 Gene

mRNA/cDNA for LOC105373021 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105373021 Gene

No ASD Table

Relevant External Links for LOC105373021 Gene

GeneLoc Exon Structure for
LOC105373021

Expression for LOC105373021 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105373021 Gene

Orthologs for LOC105373021 Gene

Evolution for LOC105373021 Gene

ENSEMBL:
Gene Tree for LOC105373021 (if available)
TreeFam:
Gene Tree for LOC105373021 (if available)

No data available for Orthologs for LOC105373021 Gene

Paralogs for LOC105373021 Gene

No data available for Paralogs for LOC105373021 Gene

Variants for LOC105373021 Gene

Sequence variations from dbSNP and Humsavar for LOC105373021 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs587777546 Pathogenic 36,763,972(+) TGCTG(C/T)AGTTG intron-variant, reference, missense
rs1000026886 -- 36,764,548(+) ACATT(A/T)TTGTG intron-variant
rs1000036458 -- 36,727,636(+) TCACC(C/T)GTTTT intron-variant
rs1000067366 -- 36,724,378(+) GTGCA(C/T)GTAGT intron-variant
rs1000111059 -- 36,713,261(+) GGCTC(A/G)AGGAA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105373021 Gene

Disorders for LOC105373021 Gene

Relevant External Links for LOC105373021

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105373021

No disorders were found for LOC105373021 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105373021 Gene

Publications for LOC105373021 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60

Products for LOC105373021 Gene

Sources for LOC105373021 Gene

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