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Aliases for LOC105372399 Gene

Subcategory (RNA class) for LOC105372399 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105372399 Gene

  • Uncharacterized LOC105372399 3
  • AC011500.2 5

External Ids for LOC105372399 Gene

Previous GeneCards Identifiers for LOC105372399 Gene

  • GC19U902077

Summaries for LOC105372399 Gene

GeneCards Summary for LOC105372399 Gene

LOC105372399 (Uncharacterized LOC105372399) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105372399 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105372399 Gene

Genomics for LOC105372399 Gene

Regulatory Elements for LOC105372399 Gene

Enhancers for LOC105372399 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19H039427 2.1 FANTOM5 Ensembl ENCODE dbSUPER 14.7 -115.3 -115322 9 MLX ZFP64 DMAP1 YY1 ZNF416 ZNF143 SP3 NFYC ZFP41 SSRP1 HNRNPL RPS16 ZNF780B FBL SUPT5H AKT2 EID2B RN7SL566P PLEKHG2 SAMD4B
GH19H038673 2.1 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -852.6 -852582 41 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 SP3 ZC3H11A MEF2D HNRNPL ZNF573 ACTN4 CATSPERG PAF1 ZNF607 ENSG00000266963 ENSG00000269688 CAPN12 SUPT5H
GH19H039397 2 FANTOM5 ENCODE dbSUPER 14.7 -140.4 -140394 20 MLX ZFP64 FEZF1 DMAP1 YBX1 YY1 SLC30A9 ZNF416 ZNF143 ZNF548 HNRNPL ZNF780B FBL SUPT5H AKT2 RN7SL566P ZNF780A EID2B PLEKHG2 ZFP36
GH19H039073 1.8 FANTOM5 Ensembl ENCODE dbSUPER 14.6 -473.5 -473525 1 ZNF493 SIN3A ZNF2 ZNF121 GLIS2 FOS ATF7 SP3 YY2 REST ZNF780B HNRNPL SUPT5H EID2B PAF1 ZNF546 ENSG00000266963 PAK4 FBL MED29
GH19H038647 1.8 FANTOM5 ENCODE dbSUPER 14.6 -887.7 -887676 25 ZFP64 FEZF1 DMAP1 YY1 ZNF143 ZNF548 SP3 ZC3H11A NFYC ZFP41 HNRNPL ZFP30 ZNF781 ZNF573 ZNF607 ENSG00000267152 SUPT5H PAK4 PAF1 PLEKHG2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105372399 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105372399 Gene

Chromosome:
19
Start:
39,547,468 bp from pter
End:
39,555,859 bp from pter
Size:
8,392 bases
Orientation:
Plus strand

Genomic View for LOC105372399 Gene

Genes around LOC105372399 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105372399 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105372399 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105372399 Gene

Proteins for LOC105372399 Gene

Post-translational modifications for LOC105372399 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105372399 Gene

Domains & Families for LOC105372399 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105372399 Gene

Function for LOC105372399 Gene

Phenotypes From GWAS Catalog for LOC105372399 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105372399 Gene

Localization for LOC105372399 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105372399 Gene

Pathways & Interactions for LOC105372399 Gene

SuperPathways for LOC105372399 Gene

No Data Available

Interacting Proteins for LOC105372399 Gene

Gene Ontology (GO) - Biological Process for LOC105372399 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105372399 Gene

Drugs & Compounds for LOC105372399 Gene

No Compound Related Data Available

Transcripts for LOC105372399 Gene

mRNA/cDNA for LOC105372399 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105372399 Gene

No ASD Table

Relevant External Links for LOC105372399 Gene

GeneLoc Exon Structure for
LOC105372399

Expression for LOC105372399 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105372399 Gene

Orthologs for LOC105372399 Gene

Evolution for LOC105372399 Gene

ENSEMBL:
Gene Tree for LOC105372399 (if available)
TreeFam:
Gene Tree for LOC105372399 (if available)

No data available for Orthologs for LOC105372399 Gene

Paralogs for LOC105372399 Gene

No data available for Paralogs for LOC105372399 Gene

Variants for LOC105372399 Gene

Sequence variations from dbSNP and Humsavar for LOC105372399 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type
rs1000031107 -- 39,548,270(+) CCGAG(C/T)AGCTG intron-variant
rs1000068520 -- 39,549,240(+) CGCCA(G/T)GTTGG intron-variant
rs1000652734 -- 39,551,615(+) TGCCC(A/C)CTAGA intron-variant
rs1000672662 -- 39,550,768(+) TCTGA(C/T)TGTTT intron-variant
rs1001176944 -- 39,556,059(+) TGAAC(A/C)AGGAG downstream-variant-500B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105372399 Gene

Disorders for LOC105372399 Gene

No disorders were found for LOC105372399 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105372399 Gene

Publications for LOC105372399 Gene

No publications were found for LOC105372399 Gene.

Products for LOC105372399 Gene

Sources for LOC105372399 Gene

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