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Aliases for LOC105371983 Gene

Subcategory (RNA class) for LOC105371983 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105371983 Gene

  • Uncharacterized LOC105371983 3

External Ids for LOC105371983 Gene

Previous GeneCards Identifiers for LOC105371983 Gene

  • GC18U900888

Summaries for LOC105371983 Gene

GeneCards Summary for LOC105371983 Gene

LOC105371983 (Uncharacterized LOC105371983) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371983 Gene

Genomics for LOC105371983 Gene

Regulatory Elements for LOC105371983 Gene

Enhancers for LOC105371983 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18G010032 0.8 Ensembl ENCODE 0.7 -3.9 -3937 1.4 CTCF PHF8 HDAC2 RAD21 KDM6A LOC105371983 LOC105371984
GH18G010039 1.1 FANTOM5 Ensembl ENCODE 0.4 -11.7 -11699 1.8 FOSL1 POLR2A SMARCA4 NR3C1 FOS NR2F2 APCDD1 LOC105371983 LOC105371984
GH18G010014 1 Ensembl ENCODE 0.4 +12.9 12897 3.1 GTF2F1 TBP CTCF JUN RAD21 RFX5 ZNF316 SMC3 FOS MAFK NAPG LOC105371990 LOC105371983 GC18P009951 PIR32710
GH18G010056 1.2 FANTOM5 Ensembl ENCODE 0.3 -29.9 -29864 4.8 JUN BHLHE40 CEBPB ZKSCAN1 JUND NFIC FOS NFE2L2 TCF7L2 NAPG RAB31 VAPA LOC105371983 LOC105371984
GH18G010009 0.7 Ensembl ENCODE 0.4 +18.0 18008 2.4 JUND NR3C1 RAD21 TXNDC2 LOC105371983 GC18P009951 PIR32710
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105371983 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105371983 Gene

Chromosome:
18
Start:
10,027,198 bp from pter
End:
10,028,945 bp from pter
Size:
1,748 bases
Orientation:
Minus strand

Genomic View for LOC105371983 Gene

Genes around LOC105371983 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371983 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371983 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371983 Gene

Proteins for LOC105371983 Gene

Post-translational modifications for LOC105371983 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371983 Gene

Domains & Families for LOC105371983 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371983 Gene

Function for LOC105371983 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371983 Gene

Localization for LOC105371983 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105371983 Gene

Pathways & Interactions for LOC105371983 Gene

SuperPathways for LOC105371983 Gene

No Data Available

Interacting Proteins for LOC105371983 Gene

Gene Ontology (GO) - Biological Process for LOC105371983 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371983 Gene

Drugs & Compounds for LOC105371983 Gene

No Compound Related Data Available

Transcripts for LOC105371983 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371983 Gene

No ASD Table

Relevant External Links for LOC105371983 Gene

GeneLoc Exon Structure for
LOC105371983

No data available for mRNA/cDNA for LOC105371983 Gene

Expression for LOC105371983 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371983 Gene

Orthologs for LOC105371983 Gene

No data available for Orthologs and Evolution for LOC105371983 Gene

Paralogs for LOC105371983 Gene

No data available for Paralogs for LOC105371983 Gene

Variants for LOC105371983 Gene

Sequence variations from dbSNP and Humsavar for LOC105371983 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1000240892 -- 10,027,267(+) GGCCC(G/T)GCCAC nc-transcript-variant
rs1000291954 -- 10,027,535(+) GGAGG(C/T)AAACT intron-variant
rs1001242567 -- 10,030,012(+) TGAAA(A/T)TGTGA upstream-variant-2KB
rs1001816610 -- 10,030,251(+) TTTAG(C/G)CTTGC upstream-variant-2KB
rs1002244886 -- 10,029,564(+) ATTAT(G/T)TATTA upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105371983 Gene

Disorders for LOC105371983 Gene

No disorders were found for LOC105371983 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371983 Gene

Publications for LOC105371983 Gene

No publications were found for LOC105371983 Gene.

Products for LOC105371983 Gene

Sources for LOC105371983 Gene

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