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Aliases for LOC105371967 Gene

Subcategory (RNA class) for LOC105371967 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105371967 Gene

  • Uncharacterized LOC105371967 3
  • AP002478.1 5

External Ids for LOC105371967 Gene

Previous GeneCards Identifiers for LOC105371967 Gene

  • GC18U901040

Summaries for LOC105371967 Gene

GeneCards Summary for LOC105371967 Gene

LOC105371967 (Uncharacterized LOC105371967) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371967 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371967 Gene

Genomics for LOC105371967 Gene

Regulatory Elements for LOC105371967 Gene

Enhancers for LOC105371967 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH18H003647 1.9 FANTOM5 Ensembl ENCODE dbSUPER 6.2 -0.3 -304 8 FOXA2 SIN3A FOS SP3 KAT8 MEF2D RCOR2 NR2C1 HMBOX1 KDM1A DLGAP1-AS1 LOC105371967 DLGAP1-AS2
GH18H003663 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +13.2 13239 4 HDGF PKNOX1 FOXA2 MLX ARNT ARID4B ZNF766 ZNF143 SP5 MXD4 DLGAP1-AS1 PIR46587 LOC105371967
GH18H003658 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +7.6 7575 3 TBP ATF1 TBL1XR1 GATA2 ELK1 POLR3A ATF7 CAVIN1 CEBPB JUNB TGIF1 LOC105371967 PIR46587
GH18H003615 2.1 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -31.3 -31257 12 MLX DMAP1 YY1 NFYC ZC3H11A MEF2D SSRP1 GLIS1 RCOR2 NBN TGIF1 MYL12A MYL12B DLGAP1-AS1 RPL21P127 SMCHD1 CBX3P2 DLGAP1-AS2 LOC105371967
GH18H003601 1.7 FANTOM5 ENCODE dbSUPER 0.2 -45.8 -45773 11 PKNOX1 FOXA2 MLX ZFP64 ARID4B FEZF1 DMAP1 YY1 FOS DEK DLGAP1-AS2 CBX3P2 MYL12B DLGAP1-AS1 LOC101927044 DLGAP1 LOC105371967
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105371967 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105371967 Gene

Chromosome:
18
Start:
3,652,733 bp from pter
End:
3,656,282 bp from pter
Size:
3,550 bases
Orientation:
Plus strand

Genomic View for LOC105371967 Gene

Genes around LOC105371967 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371967 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371967 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371967 Gene

Proteins for LOC105371967 Gene

Post-translational modifications for LOC105371967 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371967 Gene

Domains & Families for LOC105371967 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371967 Gene

Function for LOC105371967 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371967 Gene

Localization for LOC105371967 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371967 Gene

Pathways & Interactions for LOC105371967 Gene

SuperPathways for LOC105371967 Gene

No Data Available

Interacting Proteins for LOC105371967 Gene

Gene Ontology (GO) - Biological Process for LOC105371967 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371967 Gene

Drugs & Compounds for LOC105371967 Gene

No Compound Related Data Available

Transcripts for LOC105371967 Gene

mRNA/cDNA for LOC105371967 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371967 Gene

No ASD Table

Relevant External Links for LOC105371967 Gene

GeneLoc Exon Structure for
LOC105371967

Expression for LOC105371967 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371967 Gene

Orthologs for LOC105371967 Gene

Evolution for LOC105371967 Gene

ENSEMBL:
Gene Tree for LOC105371967 (if available)
TreeFam:
Gene Tree for LOC105371967 (if available)

No data available for Orthologs for LOC105371967 Gene

Paralogs for LOC105371967 Gene

No data available for Paralogs for LOC105371967 Gene

Variants for LOC105371967 Gene

Sequence variations from dbSNP and Humsavar for LOC105371967 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1000148197 -- 3,651,564(+) AAGGC(A/G)GTCAG intron-variant, upstream-variant-2KB
rs1000451081 -- 3,652,413(+) GCCTC(A/C)AACTC intron-variant, upstream-variant-2KB
rs1001056409 -- 3,651,384(+) AACAA(A/G)AAGTT intron-variant, upstream-variant-2KB
rs1002151554 -- 3,656,522(+) ACAGA(A/G)TTTCT intron-variant, downstream-variant-500B
rs1003155823 -- 3,654,900(+) TGCCA(C/T)GAATG intron-variant, nc-transcript-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105371967 Gene

Disorders for LOC105371967 Gene

Relevant External Links for LOC105371967

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105371967

No disorders were found for LOC105371967 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105371967 Gene

Publications for LOC105371967 Gene

No publications were found for LOC105371967 Gene.

Products for LOC105371967 Gene

Sources for LOC105371967 Gene

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