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Aliases for LOC105371824 Gene

Subcategory (RNA class) for LOC105371824 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105371824 Gene

  • Uncharacterized LOC105371824 3
  • RP11-94C24.8 5

External Ids for LOC105371824 Gene

Previous GeneCards Identifiers for LOC105371824 Gene

  • GC17U902349

Summaries for LOC105371824 Gene

GeneCards Summary for LOC105371824 Gene

LOC105371824 (Uncharacterized LOC105371824) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371824 Gene

Genomics for LOC105371824 Gene

Regulatory Elements for LOC105371824 Gene

Enhancers for LOC105371824 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G050171 2.1 FANTOM5 Ensembl ENCODE dbSUPER 22.4 +346.2 346233 42.0 CREB3L1 ZFP64 DMAP1 YBX1 FEZF1 YY1 ZNF143 ZNF263 SP3 TBX21 SGCA ENSG00000262837 CACNA1G-AS1 MYCBPAP LOC105371824 FLJ45513 NXPH3 TMEM92-AS1 COL1A1 TMEM92
GH17G049735 2.3 VISTA FANTOM5 Ensembl ENCODE dbSUPER 12 +795.5 795537 15.6 CREB3L1 DMAP1 FEZF1 YY1 ZNF143 ZNF263 SP3 TBX21 MEF2D SSRP1 NXPH3 KAT7 ENSG00000230532 LOC105371824 SLC35B1 TAC4 FLJ45513 ENSG00000249406 COL1A1 LOC100288866
GH17G050262 1.9 FANTOM5 Ensembl ENCODE dbSUPER 12.2 +269.6 269574 13.4 HDGF PKNOX1 SIN3A ZBTB7B ZNF143 FOS ZNF263 SP3 MCM3 MXD4 TMEM92 LOC105371824 MYCBPAP NME1 COL1A1 LOC105371822
GH17G049569 1.7 Ensembl ENCODE dbSUPER 12 +968.6 968615 1.5 MLX CREB3L1 AGO1 DMAP1 YY1 ZNF143 ZNF548 ZNF263 SP3 MEF2D ENSG00000230532 NXPH3 LOC105371824 SUMO2P17 ENSG00000262837 CACNA1G-AS1 LOC100288866 MIR6165
GH17G050539 1.4 ENCODE dbSUPER 13.6 -3.3 -3314 4.9 HDGF PKNOX1 FOXA2 MLX ARNT CREB3L1 AGO1 ARID4B SIN3A DMAP1 SPATA20 ENSG00000262837 LOC105371824 EPN3 UTP18
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105371824 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105371824 Gene

Chromosome:
17
Start:
50,537,294 bp from pter
End:
50,538,754 bp from pter
Size:
1,461 bases
Orientation:
Minus strand

Genomic View for LOC105371824 Gene

Genes around LOC105371824 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371824 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371824 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371824 Gene

Proteins for LOC105371824 Gene

Post-translational modifications for LOC105371824 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371824 Gene

Domains & Families for LOC105371824 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371824 Gene

Function for LOC105371824 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371824 Gene

Localization for LOC105371824 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105371824 Gene

Pathways & Interactions for LOC105371824 Gene

SuperPathways for LOC105371824 Gene

No Data Available

Interacting Proteins for LOC105371824 Gene

Gene Ontology (GO) - Biological Process for LOC105371824 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371824 Gene

Drugs & Compounds for LOC105371824 Gene

No Compound Related Data Available

Transcripts for LOC105371824 Gene

mRNA/cDNA for LOC105371824 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371824 Gene

No ASD Table

Relevant External Links for LOC105371824 Gene

GeneLoc Exon Structure for
LOC105371824

Expression for LOC105371824 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371824 Gene

Orthologs for LOC105371824 Gene

Evolution for LOC105371824 Gene

ENSEMBL:
Gene Tree for LOC105371824 (if available)
TreeFam:
Gene Tree for LOC105371824 (if available)

No data available for Orthologs for LOC105371824 Gene

Paralogs for LOC105371824 Gene

No data available for Paralogs for LOC105371824 Gene

Variants for LOC105371824 Gene

Sequence variations from dbSNP and Humsavar for LOC105371824 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000111981 -- 50,537,898(+) CTCCA(C/T)CCGGG intron-variant
rs1000897065 -- 50,538,085(+) CTCCT(A/C)TTCGT nc-transcript-variant, reference, missense
rs1002239869 -- 50,537,555(+) CAGAC(A/T)CATGG intron-variant
rs1002352902 -- 50,537,803(+) AGTCA(A/G)GGCAC intron-variant
rs1002799904 -- 50,540,221(+) TCTGA(-/GCCGCG)GCTGC intron-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105371824 Gene

Disorders for LOC105371824 Gene

Relevant External Links for LOC105371824

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC105371824

No disorders were found for LOC105371824 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC105371824 Gene

Publications for LOC105371824 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for LOC105371824 Gene

Sources for LOC105371824 Gene

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