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Aliases for LOC105371459 Gene

Subcategory (RNA class) for LOC105371459 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105371459 Gene

  • Uncharacterized LOC105371459 3

External Ids for LOC105371459 Gene

Previous GeneCards Identifiers for LOC105371459 Gene

  • GC01U905001

Summaries for LOC105371459 Gene

GeneCards Summary for LOC105371459 Gene

LOC105371459 (Uncharacterized LOC105371459) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105371459 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371459 Gene

Genomics for LOC105371459 Gene

Regulatory Elements for LOC105371459 Gene

Enhancers for LOC105371459 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H157967 1.2 FANTOM5 Ensembl ENCODE 0.4 -10.0 -9955 2 GTF2F1 CTCF ZNF654 JUN RAD21 JUND POLR2A SMC3 ZNF143 MAFK KIRREL1 LOC105371459 LOC105371458
GH01H157964 0.8 Ensembl ENCODE 0.4 -13.2 -13234 3 HNF1A JUND MAX HNF4A KIRREL1 LOC105371459 LOC105371458
GH01H157962 0.8 ENCODE 0.4 -16.6 -16599 1 ZBTB21 JUN MAX ZNF366 EED FOS CEBPB ZEB2 EP300 ATF2 KIRREL1 LOC105371459 LOC105371458
GH01H157963 0.7 ENCODE 0.4 -15.5 -15506 0 SCRT1 ZNF639 CTCF ZNF654 TRIM22 REST ZNF2 RAD21 ZEB1 ZSCAN21 LOC246784 KIRREL1 CD1E LOC105371459 LOC105371458
GH01H157984 0.6 ENCODE 0.4 +5.4 5355 0 ZNF362 ZBTB48 GLIS1 GFI1B OVOL3 PRDM10 ATF2 LOC105371459 KIRREL1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105371459 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105371459 Gene

Chromosome:
1
Start:
157,979,311 bp from pter
End:
157,986,183 bp from pter
Size:
6,873 bases
Orientation:
Plus strand

Genomic View for LOC105371459 Gene

Genes around LOC105371459 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371459 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371459 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371459 Gene

Proteins for LOC105371459 Gene

Post-translational modifications for LOC105371459 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371459 Gene

Domains & Families for LOC105371459 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371459 Gene

Function for LOC105371459 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371459 Gene

Localization for LOC105371459 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105371459 Gene

Pathways & Interactions for LOC105371459 Gene

SuperPathways for LOC105371459 Gene

No Data Available

Interacting Proteins for LOC105371459 Gene

Gene Ontology (GO) - Biological Process for LOC105371459 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371459 Gene

Drugs & Compounds for LOC105371459 Gene

No Compound Related Data Available

Transcripts for LOC105371459 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371459 Gene

No ASD Table

Relevant External Links for LOC105371459 Gene

GeneLoc Exon Structure for
LOC105371459

No data available for mRNA/cDNA for LOC105371459 Gene

Expression for LOC105371459 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371459 Gene

Orthologs for LOC105371459 Gene

No data available for Orthologs and Evolution for LOC105371459 Gene

Paralogs for LOC105371459 Gene

No data available for Paralogs for LOC105371459 Gene

Variants for LOC105371459 Gene

Sequence variations from dbSNP and Humsavar for LOC105371459 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1000297621 -- 157,983,679(+) ACTGG(A/G)TGAGC intron-variant
rs1000669617 -- 157,978,945(+) CTGGC(C/G)GGGCC upstream-variant-2KB
rs1001271442 -- 157,984,916(+) CCTCC(C/T)CTCTA intron-variant
rs1001454403 -- 157,982,051(+) AAAGA(A/G)AGAAA intron-variant
rs1001899728 -- 157,982,151(+) AAAAA(A/C)CCTAA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105371459 Gene

Disorders for LOC105371459 Gene

No disorders were found for LOC105371459 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371459 Gene

Publications for LOC105371459 Gene

No publications were found for LOC105371459 Gene.

Products for LOC105371459 Gene

Sources for LOC105371459 Gene

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