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Aliases for LOC105371143 Gene

Subcategory (RNA class) for LOC105371143 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105371143 Gene

  • Uncharacterized LOC105371143 3
  • CTD-2313J23.1 5

External Ids for LOC105371143 Gene

Previous GeneCards Identifiers for LOC105371143 Gene

  • GC16U901934

Summaries for LOC105371143 Gene

GeneCards Summary for LOC105371143 Gene

LOC105371143 (Uncharacterized LOC105371143) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105371143 Gene

Genomics for LOC105371143 Gene

Regulatory Elements for LOC105371143 Gene

Enhancers for LOC105371143 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G024493 0.9 ENCODE 0.7 +1.1 1068 1.1 RB1 ARID4B BRCA1 ZSCAN9 ZNF48 RAD21 RFX5 EGR1 ZNF143 FOS LOC105371143 RNU7-24P
GH16G024497 0.6 ENCODE 0.7 -2.4 -2418 0.2 NFIB CEBPB ZNF398 RAD21 JUND NFIC SMC3 ZNF600 PRDM10 LOC105371143 RBBP6
GH16G024499 0.6 ENCODE 0.7 -4.2 -4218 0.2 CTCF ZNF654 SMC3 REST ZNF2 MYC RAD21 LOC105371143 RBBP6
GH16G024516 1.2 Ensembl ENCODE 0.3 -22.1 -22099 0.7 HDAC1 FOXA2 RB1 ARID4B ZNF2 RAD21 RFX5 YY1 GTF3C2 ZNF121 ENSG00000261723 PALB2 ENSG00000260751 DCTN5 LCMT1-AS2 RBBP6 LOC105371143
GH16G024525 1.2 Ensembl ENCODE 0.3 -31.1 -31055 1.8 ATF1 FOXA2 PKNOX1 BRCA1 GTF3C2 ZNF121 SP3 MEF2D MAFF STAT3 ENSG00000261723 PALB2 ENSG00000260751 DCTN5 LCMT1-AS2 RBBP6 LOC105371143
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105371143 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105371143 Gene

Chromosome:
16
Start:
24,465,527 bp from pter
End:
24,495,177 bp from pter
Size:
29,651 bases
Orientation:
Minus strand

Genomic View for LOC105371143 Gene

Genes around LOC105371143 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105371143 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105371143 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105371143 Gene

Proteins for LOC105371143 Gene

Post-translational modifications for LOC105371143 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105371143 Gene

Domains & Families for LOC105371143 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105371143 Gene

Function for LOC105371143 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105371143 Gene

Localization for LOC105371143 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105371143 Gene

Pathways & Interactions for LOC105371143 Gene

SuperPathways for LOC105371143 Gene

No Data Available

Interacting Proteins for LOC105371143 Gene

Gene Ontology (GO) - Biological Process for LOC105371143 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105371143 Gene

Drugs & Compounds for LOC105371143 Gene

No Compound Related Data Available

Transcripts for LOC105371143 Gene

mRNA/cDNA for LOC105371143 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105371143 Gene

No ASD Table

Relevant External Links for LOC105371143 Gene

GeneLoc Exon Structure for
LOC105371143

Expression for LOC105371143 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105371143 Gene

Orthologs for LOC105371143 Gene

Evolution for LOC105371143 Gene

ENSEMBL:
Gene Tree for LOC105371143 (if available)
TreeFam:
Gene Tree for LOC105371143 (if available)

No data available for Orthologs for LOC105371143 Gene

Paralogs for LOC105371143 Gene

No data available for Paralogs for LOC105371143 Gene

Variants for LOC105371143 Gene

Sequence variations from dbSNP and Humsavar for LOC105371143 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000195401 -- 24,472,500(+) CTCCC(A/G)AGTAG intron-variant
rs1000220663 -- 24,474,943(+) CAATT(A/C)AAATT intron-variant
rs1000247689 -- 24,472,129(+) AACTG(A/C)AAGGC intron-variant
rs1000266276 -- 24,486,603(+) GCCAG(A/G)AGTCC intron-variant
rs1000305032 -- 24,492,338(+) TGGGC(A/G)TGGTG intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105371143 Gene

Disorders for LOC105371143 Gene

No disorders were found for LOC105371143 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105371143 Gene

Publications for LOC105371143 Gene

No publications were found for LOC105371143 Gene.

Products for LOC105371143 Gene

Sources for LOC105371143 Gene

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