Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC105370689 Gene

Subcategory (RNA class) for LOC105370689 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105370689 Gene

  • Uncharacterized LOC105370689 3
  • CTD-2134A5.3 3
  • AL132712.2 5

External Ids for LOC105370689 Gene

Previous GeneCards Identifiers for LOC105370689 Gene

  • GC14U901691

Summaries for LOC105370689 Gene

GeneCards Summary for LOC105370689 Gene

LOC105370689 (Uncharacterized LOC105370689) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105370689 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370689 Gene

Genomics for LOC105370689 Gene

Regulatory Elements for LOC105370689 Gene

Enhancers for LOC105370689 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H103871 1.3 Ensembl ENCODE dbSUPER 0.7 +0.1 114 1 KLF1 MAX RAD21 YY1 POLR2A EGR1 EED RUNX3 KLF8 IKZF2 KLC1 LOC105370689 LOC105370690
GH14H103867 1.2 Ensembl ENCODE dbSUPER 0.7 -4.3 -4309 1 TFAP4 MAZ KLF1 ZBTB8A NR3C1 GLIS2 ZBTB48 GLIS1 PATZ1 KLF9 LOC105370689 PPP1R13B
GH14H103853 1.5 Ensembl ENCODE dbSUPER 0.4 -16.7 -16691 3 PKNOX1 DMAP1 ZNF2 ZBTB7B GLIS2 ELK1 ZNF207 FOS ZNF548 SP3 XRCC3 BAG5 ENSG00000202275 ENSG00000269958 ENSG00000260285 EXOC3L4 PPP1R13B LOC105370689
GH14H103861 1 ENCODE dbSUPER 0.4 -9.8 -9771 0 TBP DRAP1 TFAP4 PKNOX1 FOXA2 SAP130 ARID4B POLR2A FOS HOMEZ ZFYVE21 LOC105370689 PPP1R13B
GH14H103869 0.5 dbSUPER 0.7 -2.0 -2017 1 ZBTB48 PRDM10 GLI4 RAD21 ZIC2 C14orf2 LOC105370689 PPP1R13B
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105370689 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105370689 Gene

Chromosome:
14
Start:
103,872,106 bp from pter
End:
103,880,378 bp from pter
Size:
8,273 bases
Orientation:
Plus strand

Genomic View for LOC105370689 Gene

Genes around LOC105370689 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370689 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370689 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370689 Gene

Proteins for LOC105370689 Gene

Post-translational modifications for LOC105370689 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370689 Gene

Domains & Families for LOC105370689 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370689 Gene

Function for LOC105370689 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370689 Gene

Localization for LOC105370689 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105370689 Gene

Pathways & Interactions for LOC105370689 Gene

SuperPathways for LOC105370689 Gene

No Data Available

Interacting Proteins for LOC105370689 Gene

Gene Ontology (GO) - Biological Process for LOC105370689 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370689 Gene

Drugs & Compounds for LOC105370689 Gene

No Compound Related Data Available

Transcripts for LOC105370689 Gene

mRNA/cDNA for LOC105370689 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370689 Gene

No ASD Table

Relevant External Links for LOC105370689 Gene

GeneLoc Exon Structure for
LOC105370689

Expression for LOC105370689 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370689 Gene

Orthologs for LOC105370689 Gene

Evolution for LOC105370689 Gene

ENSEMBL:
Gene Tree for LOC105370689 (if available)
TreeFam:
Gene Tree for LOC105370689 (if available)

No data available for Orthologs for LOC105370689 Gene

Paralogs for LOC105370689 Gene

No data available for Paralogs for LOC105370689 Gene

Variants for LOC105370689 Gene

Sequence variations from dbSNP and Humsavar for LOC105370689 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1000436185 -- 103,873,890(+) AGGGC(A/G)AGACT intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000745435 -- 103,874,270(+) CGCCT(C/G)GGCCT intron-variant, upstream-variant-2KB
rs1000914109 -- 103,877,618(+) TTCTA(C/T)TGCTT intron-variant
rs1001261560 -- 103,877,331(+) CCGCA(C/T)CCGGC intron-variant
rs1001507619 -- 103,873,838(+) AGCCC(A/T)GCTGT intron-variant, nc-transcript-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105370689 Gene

Disorders for LOC105370689 Gene

No disorders were found for LOC105370689 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370689 Gene

Publications for LOC105370689 Gene

No publications were found for LOC105370689 Gene.

Products for LOC105370689 Gene

Sources for LOC105370689 Gene

Content
Loading form....