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Aliases for LOC105370007 Gene

Subcategory (RNA class) for LOC105370007 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105370007 Gene

  • Uncharacterized LOC105370007 3

External Ids for LOC105370007 Gene

Previous GeneCards Identifiers for LOC105370007 Gene

  • GC12U902347

Summaries for LOC105370007 Gene

GeneCards Summary for LOC105370007 Gene

LOC105370007 (Uncharacterized LOC105370007) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105370007 Gene

Genomics for LOC105370007 Gene

Regulatory Elements for LOC105370007 Gene

Enhancers for LOC105370007 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G116492 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -6.7 -6726 5.4 HDGF PKNOX1 CREB3L1 ARNT SIN3A ZBTB7B ZNF766 CBX5 ZNF207 FOS FBXW8 MED13L ENSG00000258034 LINC00173 MAP1LC3B2 LOC105370007 LOC105370008
GH12G116453 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +32.7 32691 4.1 PKNOX1 ATF1 ARNT SIN3A ZNF143 FOS NCOA1 MEF2D SREBF1 PBX2 MAP1LC3B2 MED13L MIR4472-2 LOC105370007
GH12G116443 1.5 FANTOM5 Ensembl ENCODE 0.3 +44.3 44328 1.2 HDAC1 PKNOX1 ATF1 ZNF2 ZNF335 ZNF766 GLIS2 ZNF366 EGR1 SCRT2 MAP1LC3B2 MED13L MIR4472-2 LOC105370007
GH12G116501 1.1 ENCODE dbSUPER 0.4 -14.4 -14410 2.0 ELF3 PKNOX1 NFIB BMI1 RAD21 RARA ZNF121 FOS RCOR1 SP5 MAP1LC3B2 LOC105370008 LOC105370007
GH12G116505 1 ENCODE dbSUPER 0.4 -17.8 -17805 2.3 BCOR PKNOX1 NFIB MAX ZMYM3 ZNF384 RBBP5 BMI1 BCL11B HIC1 MAP1LC3B2 LINC00173 LOC105370008 LOC105370007
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105370007 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105370007 Gene

Chromosome:
12
Start:
116,484,428 bp from pter
End:
116,488,505 bp from pter
Size:
4,078 bases
Orientation:
Minus strand

Genomic View for LOC105370007 Gene

Genes around LOC105370007 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105370007 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105370007 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105370007 Gene

Proteins for LOC105370007 Gene

Post-translational modifications for LOC105370007 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105370007 Gene

Domains & Families for LOC105370007 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105370007 Gene

Function for LOC105370007 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105370007 Gene

Localization for LOC105370007 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105370007 Gene

Pathways & Interactions for LOC105370007 Gene

SuperPathways for LOC105370007 Gene

No Data Available

Interacting Proteins for LOC105370007 Gene

Gene Ontology (GO) - Biological Process for LOC105370007 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105370007 Gene

Drugs & Compounds for LOC105370007 Gene

No Compound Related Data Available

Transcripts for LOC105370007 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105370007 Gene

No ASD Table

Relevant External Links for LOC105370007 Gene

GeneLoc Exon Structure for
LOC105370007

No data available for mRNA/cDNA for LOC105370007 Gene

Expression for LOC105370007 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105370007 Gene

Orthologs for LOC105370007 Gene

No data available for Orthologs and Evolution for LOC105370007 Gene

Paralogs for LOC105370007 Gene

No data available for Paralogs for LOC105370007 Gene

Variants for LOC105370007 Gene

Sequence variations from dbSNP and Humsavar for LOC105370007 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000458932 -- 116,489,797(+) TTGTA(-/T)TTTTT upstream-variant-2KB
rs1000891163 -- 116,488,653(+) GGAGA(C/T)AAATT upstream-variant-2KB
rs1001156692 -- 116,488,268(+) ATATC(A/G)TACAC intron-variant
rs1001199352 -- 116,488,344(+) AGGTT(A/G)CAGTC nc-transcript-variant
rs1001591492 -- 116,487,184(+) GTGTG(A/C)TGTGG intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105370007 Gene

Disorders for LOC105370007 Gene

No disorders were found for LOC105370007 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105370007 Gene

Publications for LOC105370007 Gene

No publications were found for LOC105370007 Gene.

Products for LOC105370007 Gene

Sources for LOC105370007 Gene

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