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Aliases for LOC105369808 Gene

Subcategory (RNA class) for LOC105369808 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC105369808 Gene

  • Uncharacterized LOC105369808 3
  • AC090023.1 5

External Ids for LOC105369808 Gene

Previous GeneCards Identifiers for LOC105369808 Gene

  • GC12U902115

Summaries for LOC105369808 Gene

GeneCards Summary for LOC105369808 Gene

LOC105369808 (Uncharacterized LOC105369808) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC105369808 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369808 Gene

Genomics for LOC105369808 Gene

Regulatory Elements for LOC105369808 Gene

Enhancers for LOC105369808 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H065821 2 FANTOM5 Ensembl ENCODE dbSUPER 14.6 +269.4 269399 10.3 PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 ZNF2 ZNF302 LEMD3 ENSG00000256915 LINC02425 LOC105369808 OSBPL9P4 LOC100129940 TMBIM4 ENSG00000250280 ENSG00000256083 RPSAP52
GH12H065946 1.5 Ensembl ENCODE dbSUPER 14.6 +394.7 394727 10.9 PKNOX1 ATF1 FOXA2 FEZF1 ZNF2 FOS KLF7 ATF7 RUNX3 SP3 LEMD3 LINC02425 ENSG00000256915 LOC105369808 OSBPL9P4 LOC100129940 HMGA2 RPSAP52 HELB GC12P065952
GH12H066168 1.4 ENCODE dbSUPER 14.6 +612.5 612541 2.7 FEZF1 DMAP1 YY1 ZNF416 ZNF143 SP3 MEF2D ZNF610 ZNF585B GLIS1 LEMD3 MSRB3 LINC02425 OSBPL9P4 LOC105369808 ENSG00000256915 LOC100507065 ENSG00000250280 LLPH-AS1 ENSG00000228144
GH12H065555 1.4 Ensembl ENCODE dbSUPER 0.7 +0.0 26 2.1 RB1 ZNF2 ZSCAN9 RAD21 YY1 RFX5 ZNF416 ZNF143 ATF7 CREM LEMD3 LINC02454 LOC105369808
GH12H065563 1.4 Ensembl ENCODE dbSUPER 0.4 +8.9 8943 4.5 HDAC1 ATF1 ARNT GATA2 FOS USF2 SMARCA4 IKZF1 HMBOX1 ZNF24 LINC02454 LOC105369808
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105369808 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC105369808 Gene

Genomic Locations for LOC105369808 Gene
chr12:65,556,993-65,560,889
(GRCh38/hg38)
Size:
3,897 bases
Orientation:
Plus strand
chr12:65,953,371-65,954,669
(GRCh37/hg19)

Genomic View for LOC105369808 Gene

Genes around LOC105369808 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369808 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369808 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369808 Gene

Proteins for LOC105369808 Gene

Post-translational modifications for LOC105369808 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369808 Gene

Domains & Families for LOC105369808 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369808 Gene

Function for LOC105369808 Gene

Phenotypes From GWAS Catalog for LOC105369808 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369808 Gene

Localization for LOC105369808 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC105369808 Gene

Pathways & Interactions for LOC105369808 Gene

SuperPathways for LOC105369808 Gene

No Data Available

Interacting Proteins for LOC105369808 Gene

Gene Ontology (GO) - Biological Process for LOC105369808 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369808 Gene

Drugs & Compounds for LOC105369808 Gene

No Compound Related Data Available

Transcripts for LOC105369808 Gene

mRNA/cDNA for LOC105369808 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369808 Gene

No ASD Table

Relevant External Links for LOC105369808 Gene

GeneLoc Exon Structure for
LOC105369808

Expression for LOC105369808 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369808 Gene

Orthologs for LOC105369808 Gene

Evolution for LOC105369808 Gene

ENSEMBL:
Gene Tree for LOC105369808 (if available)
TreeFam:
Gene Tree for LOC105369808 (if available)

No data available for Orthologs for LOC105369808 Gene

Paralogs for LOC105369808 Gene

No data available for Paralogs for LOC105369808 Gene

Variants for LOC105369808 Gene

Sequence variations from dbSNP and Humsavar for LOC105369808 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1001004625 -- 65,558,485(+) CCCAG(A/C)ATCTC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001099061 -- 65,558,787(+) CAAAC(A/C)AGCCC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001275551 -- 65,559,369(+) AAAGG(A/G)TAGAT intron-variant
rs1001580770 -- 65,558,922(+) TCAAT(A/G)CAGGC intron-variant, upstream-variant-2KB
rs1001618758 -- 65,557,466(+) AAGCC(A/G)GCCAA intron-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105369808 Gene

Disorders for LOC105369808 Gene

No disorders were found for LOC105369808 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369808 Gene

Publications for LOC105369808 Gene

No publications were found for LOC105369808 Gene.

Products for LOC105369808 Gene

Sources for LOC105369808 Gene

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