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Aliases for LOC105369728 Gene

Aliases for LOC105369728 Gene

  • Serine/Arginine Repetitive Matrix Protein 1-Like 3
  • RP11-705C15.4 5

External Ids for LOC105369728 Gene

Previous GeneCards Identifiers for LOC105369728 Gene

  • GC12U902341
  • GC12M010328
  • GC12M010786
  • GC12M011037
  • GC12M011350

Summaries for LOC105369728 Gene

GeneCards Summary for LOC105369728 Gene

LOC105369728 (Serine/Arginine Repetitive Matrix Protein 1-Like) is a Protein Coding gene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369728 Gene

Genomics for LOC105369728 Gene

Regulatory Elements for LOC105369728 Gene

Enhancers for LOC105369728 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G009642 0.6 dbSUPER 29.3 +10.0 10035 2.0 SMARCE1 PKNOX1 NFRKB DDX20 ZNF175 ELF4 POLR2A IRF1 LOC105369728 CLEC2D LOC374443 CLECL1 KLRB1 ENSG00000214776 KLRA1P ENSG00000272917
GH12G009646 2 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +1.8 1802 10.0 HDGF PKNOX1 MLX ARID4B SIN3A DMAP1 SLC30A9 CBX5 ZNF143 ZNF207 CLEC2D LOC374443 KLRB1 CLECL1 CLEC12A ENSG00000214776 PHC1 CD69 CLEC7A DDX12P
GH12G009645 0.9 dbSUPER 0.4 +7.9 7949 0.7 ATF1 CBX3 ARNT ZBTB40 RAD21 CHAMP1 TCF12 ZNF766 ZNF143 RELB CLECL1 KLRB1 ENSG00000214776 ENSG00000272917 LOC105369728
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105369728 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105369728 Gene

Chromosome:
12
Start:
9,647,014 bp from pter
End:
9,653,535 bp from pter
Size:
6,522 bases
Orientation:
Minus strand

Genomic View for LOC105369728 Gene

Genes around LOC105369728 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369728 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369728 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369728 Gene

Proteins for LOC105369728 Gene

Post-translational modifications for LOC105369728 Gene

No Post-translational modifications

Other Protein References for LOC105369728 Gene

REFSEQ proteins:

No data available for DME Specific Peptides for LOC105369728 Gene

Domains & Families for LOC105369728 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369728 Gene

Function for LOC105369728 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369728 Gene

Localization for LOC105369728 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105369728 Gene

Pathways & Interactions for LOC105369728 Gene

SuperPathways for LOC105369728 Gene

No Data Available

Interacting Proteins for LOC105369728 Gene

Gene Ontology (GO) - Biological Process for LOC105369728 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369728 Gene

Drugs & Compounds for LOC105369728 Gene

No Compound Related Data Available

Transcripts for LOC105369728 Gene

mRNA/cDNA for LOC105369728 Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369728 Gene

No ASD Table

Relevant External Links for LOC105369728 Gene

GeneLoc Exon Structure for
LOC105369728

Expression for LOC105369728 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369728 Gene

Orthologs for LOC105369728 Gene

Evolution for LOC105369728 Gene

ENSEMBL:
Gene Tree for LOC105369728 (if available)
TreeFam:
Gene Tree for LOC105369728 (if available)

No data available for Orthologs for LOC105369728 Gene

Paralogs for LOC105369728 Gene

No data available for Paralogs for LOC105369728 Gene

Variants for LOC105369728 Gene

Sequence variations from dbSNP and Humsavar for LOC105369728 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000200222 -- 9,651,360(+) TCACT(A/G)CTATA intron-variant
rs1001084724 -- 9,649,801(+) AGGCA(C/T)ATTTA intron-variant
rs1001356088 -- 9,652,368(+) CGTCT(A/G)TCAAA intron-variant
rs1001637208 -- 9,646,543(+) ACATA(C/T)ATAAT intron-variant, downstream-variant-500B, upstream-variant-2KB
rs1001917925 -- 9,646,936(+) AGCCT(C/T)GTTGT intron-variant, downstream-variant-500B, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105369728 Gene

Disorders for LOC105369728 Gene

No disorders were found for LOC105369728 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369728 Gene

Publications for LOC105369728 Gene

No publications were found for LOC105369728 Gene.

Products for LOC105369728 Gene

Sources for LOC105369728 Gene

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