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Aliases for LOC105369660 Gene

Subcategory (RNA class) for LOC105369660 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105369660 Gene

  • Uncharacterized LOC105369660 3

External Ids for LOC105369660 Gene

Previous GeneCards Identifiers for LOC105369660 Gene

  • GC12U902048

Summaries for LOC105369660 Gene

GeneCards Summary for LOC105369660 Gene

LOC105369660 (Uncharacterized LOC105369660) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369660 Gene

Genomics for LOC105369660 Gene

Regulatory Elements for LOC105369660 Gene

Enhancers for LOC105369660 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G010715 1.4 ENCODE dbSUPER 0.7 -3.0 -3013 8.8 FOXA2 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9 KLRA1P TAS2R20 TAS2R43 TAS2R14 MAGOHB TAS2R31 TAS2R50 TAS2R10 TAS2R64P ENSG00000256981
GH12G010708 0.7 ENCODE dbSUPER 0.4 -13.8 -13805 1.7 ZNF680 PCBP1 STYK1 ENSG00000255958 GABARAPL1 YBX3 MAGOHB KLRC1 LOC105369660
GH12G010705 0.4 dbSUPER 0.4 -17.1 -17107 1.9 RFX5 STYK1 ENSG00000255958 GABARAPL1 YBX3 MAGOHB KLRC1 LOC105369660
GH12G010707 0.4 dbSUPER 0.4 -15.5 -15508 1.1 PCBP1 YBX3 STYK1 ENSG00000255958 GABARAPL1 MAGOHB KLRC1 LOC105369660
GH12G010701 0.4 ENCODE 0.3 -21.6 -21636 0.7 PKNOX1 POLR2A STYK1 ENSG00000255958 GABARAPL1 MAGOHB YBX3 KLRC1 LOC105369660
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105369660 on UCSC Golden Path with GeneCards custom track

Promoters for LOC105369660 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000048749 -607 3001 FOXA2 MLX WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9

Genomic Location for LOC105369660 Gene

Chromosome:
12
Start:
10,723,107 bp from pter
End:
10,727,487 bp from pter
Size:
4,381 bases
Orientation:
Plus strand

Genomic View for LOC105369660 Gene

Genes around LOC105369660 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369660 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369660 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369660 Gene

Proteins for LOC105369660 Gene

Post-translational modifications for LOC105369660 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369660 Gene

Domains & Families for LOC105369660 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369660 Gene

Function for LOC105369660 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369660 Gene

Localization for LOC105369660 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105369660 Gene

Pathways & Interactions for LOC105369660 Gene

SuperPathways for LOC105369660 Gene

No Data Available

Interacting Proteins for LOC105369660 Gene

Gene Ontology (GO) - Biological Process for LOC105369660 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369660 Gene

Drugs & Compounds for LOC105369660 Gene

No Compound Related Data Available

Transcripts for LOC105369660 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369660 Gene

No ASD Table

Relevant External Links for LOC105369660 Gene

GeneLoc Exon Structure for
LOC105369660

No data available for mRNA/cDNA for LOC105369660 Gene

Expression for LOC105369660 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369660 Gene

Orthologs for LOC105369660 Gene

No data available for Orthologs and Evolution for LOC105369660 Gene

Paralogs for LOC105369660 Gene

No data available for Paralogs for LOC105369660 Gene

Variants for LOC105369660 Gene

Sequence variations from dbSNP and Humsavar for LOC105369660 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1001247558 -- 10,721,729(+) GGAAG(C/T)AGGGC intron-variant, upstream-variant-2KB
rs1001398518 -- 10,727,811(+) AGAAC(C/T)AAAAC downstream-variant-500B
rs1001678990 -- 10,721,974(+) TCCAT(C/T)CACTG intron-variant, upstream-variant-2KB
rs1002267054 -- 10,723,266(+) CGGCG(A/G)AGGCG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs1002543510 -- 10,725,051(+) ACAAG(-/A)AAAAA nc-transcript-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105369660 Gene

Disorders for LOC105369660 Gene

No disorders were found for LOC105369660 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369660 Gene

Publications for LOC105369660 Gene

No publications were found for LOC105369660 Gene.

Products for LOC105369660 Gene

Sources for LOC105369660 Gene

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