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Aliases for LOC105369653 Gene

Subcategory (RNA class) for LOC105369653 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC105369653 Gene

  • Uncharacterized LOC105369653 3

External Ids for LOC105369653 Gene

Previous GeneCards Identifiers for LOC105369653 Gene

  • GC12U902440

Summaries for LOC105369653 Gene

GeneCards Summary for LOC105369653 Gene

LOC105369653 (Uncharacterized LOC105369653) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC105369653 Gene

Genomics for LOC105369653 Gene

Regulatory Elements for LOC105369653 Gene

Enhancers for LOC105369653 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12G009773 1.1 FANTOM5 ENCODE dbSUPER 0.7 +4.5 4536 0.3 CTCF ZNF654 SMC3 REST HNF4A RAD21 CD69 CLECL1 CLEC2A LOC105369653 LOC100419929
GH12G009756 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.9 -7901 10.0 HDGF PKNOX1 ATF1 ARNT WRNIP1 SIN3A TCF12 GATA2 ELK1 CBX5 CD69 CLECL1 KLRF1 CLEC7A OLR1 KLRB1 CLEC12A ENSG00000213443 DDX12P PZP
GH12G009792 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +26.5 26463 6.3 PKNOX1 ATF1 ARNT WRNIP1 CBX5 GATA2 ZNF143 FOS DEK JUNB CD69 CLEC7A LOC728715 CLEC2B OLR1 LOC100419929 LOC105369653
GH12G009767 0.4 dbSUPER 0.7 -0.8 -839 1.3 SCRT2 HLF CLEC2D LOC105369653 CD69
GH12G009775 0.7 Ensembl dbSUPER 0.4 +6.7 6722 0.2 PKNOX1 ZBTB33 LOC105369653 LOC100419929
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC105369653 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC105369653 Gene

Chromosome:
12
Start:
9,769,179 bp from pter
End:
9,822,815 bp from pter
Size:
53,637 bases
Orientation:
Plus strand

Genomic View for LOC105369653 Gene

Genes around LOC105369653 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC105369653 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC105369653 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC105369653 Gene

Proteins for LOC105369653 Gene

Post-translational modifications for LOC105369653 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC105369653 Gene

Domains & Families for LOC105369653 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC105369653 Gene

Function for LOC105369653 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC105369653 Gene

Localization for LOC105369653 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC105369653 Gene

Pathways & Interactions for LOC105369653 Gene

SuperPathways for LOC105369653 Gene

No Data Available

Interacting Proteins for LOC105369653 Gene

Gene Ontology (GO) - Biological Process for LOC105369653 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC105369653 Gene

Drugs & Compounds for LOC105369653 Gene

No Compound Related Data Available

Transcripts for LOC105369653 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC105369653 Gene

No ASD Table

Relevant External Links for LOC105369653 Gene

GeneLoc Exon Structure for
LOC105369653

No data available for mRNA/cDNA for LOC105369653 Gene

Expression for LOC105369653 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC105369653 Gene

Orthologs for LOC105369653 Gene

No data available for Orthologs and Evolution for LOC105369653 Gene

Paralogs for LOC105369653 Gene

No data available for Paralogs for LOC105369653 Gene

Variants for LOC105369653 Gene

Sequence variations from dbSNP and Humsavar for LOC105369653 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs1000058159 -- 9,792,718(+) TGAAA(G/T)GGCAC intron-variant
rs1000185847 -- 9,778,282(+) GTGAT(G/T)AACAT intron-variant
rs1000249516 -- 9,798,999(+) AAAAG(-/AA)AAAAA intron-variant
rs1000256797 -- 9,778,571(+) CTTCC(A/G)GCCTT intron-variant
rs1000299093 -- 9,798,418(+) AAATA(C/T)ACAAA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC105369653 Gene

Disorders for LOC105369653 Gene

No disorders were found for LOC105369653 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC105369653 Gene

Publications for LOC105369653 Gene

No publications were found for LOC105369653 Gene.

Products for LOC105369653 Gene

Sources for LOC105369653 Gene

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