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Aliases for LOC102725159 Gene

Subcategory (RNA class) for LOC102725159 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC102725159 Gene

  • Uncharacterized LOC102725159 3

External Ids for LOC102725159 Gene

Previous GeneCards Identifiers for LOC102725159 Gene

  • GC02U902942

Summaries for LOC102725159 Gene

GeneCards Summary for LOC102725159 Gene

LOC102725159 (Uncharacterized LOC102725159) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC102725159 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102725159 Gene

Genomics for LOC102725159 Gene

Regulatory Elements for LOC102725159 Gene

Enhancers for LOC102725159 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02H043844 0.7 ENCODE 0.7 -0.2 -177 1 TAF1 ZMYM3 MAX REST RAD21 NR2F2 YY1 JUND ATF3 HNF4G RN7SKP66 DYNC2LI1 ABCG5 LOC102725159 GC02P043893
GH02H043877 1.1 Ensembl ENCODE 0.3 -33.4 -33426 0 ELF3 CTCF RB1 ETV1 ARID4B CEBPG RAD21 TEAD3 GATAD1 SMC3 GC02P043893 LOC102725159
GH02H043881 0.9 ENCODE 0.3 -37.3 -37305 1 ELF3 PKNOX1 FOXA2 ARID4B SIN3A DMAP1 ZBTB40 ZSCAN9 RARA THAP11 LRPPRC GC02P043893 LOC102725159
GH02H043884 0.7 ENCODE 0.3 -40.3 -40287 0 SOX13 GATAD2A FOXA2 TEAD1 FOXA3 HLF FOXA1 GATA3 JUND CEBPA ABCG5 ABCG8 PLEKHH2 LRPPRC GC02P043893 LOC102725159
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC102725159 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC102725159 Gene

Chromosome:
2
Start:
43,843,792 bp from pter
End:
43,844,520 bp from pter
Size:
729 bases
Orientation:
Minus strand

Genomic View for LOC102725159 Gene

Genes around LOC102725159 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102725159 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102725159 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102725159 Gene

Proteins for LOC102725159 Gene

Post-translational modifications for LOC102725159 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102725159 Gene

Domains & Families for LOC102725159 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102725159 Gene

Function for LOC102725159 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102725159 Gene

Localization for LOC102725159 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC102725159 Gene

Pathways & Interactions for LOC102725159 Gene

SuperPathways for LOC102725159 Gene

No Data Available

Interacting Proteins for LOC102725159 Gene

Gene Ontology (GO) - Biological Process for LOC102725159 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102725159 Gene

Drugs & Compounds for LOC102725159 Gene

No Compound Related Data Available

Transcripts for LOC102725159 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102725159 Gene

No ASD Table

Relevant External Links for LOC102725159 Gene

GeneLoc Exon Structure for
LOC102725159

No data available for mRNA/cDNA for LOC102725159 Gene

Expression for LOC102725159 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102725159 Gene

Orthologs for LOC102725159 Gene

No data available for Orthologs and Evolution for LOC102725159 Gene

Paralogs for LOC102725159 Gene

No data available for Paralogs for LOC102725159 Gene

Variants for LOC102725159 Gene

Sequence variations from dbSNP and Humsavar for LOC102725159 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs137854891 Pathogenic 43,846,309(+) GAGCT(C/G)AGGTA nc-transcript-variant, upstream-variant-2KB, reference, stop-gained
rs75365565 Likely benign 43,844,621(+) CACGC(C/T)TGGGT intron-variant, upstream-variant-2KB
rs80025980 Likely benign 43,846,228(+) CAGCT(A/G)CCAGA nc-transcript-variant, upstream-variant-2KB, reference, missense
rs148370122 Uncertain significance 43,844,537(+) CTGAA(A/G)GTGAC nc-transcript-variant, upstream-variant-2KB, reference, missense
rs372921526 Uncertain significance 43,846,264(+) CCTAA(A/G)CTTCA nc-transcript-variant, upstream-variant-2KB, reference, missense

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC102725159 Gene

Disorders for LOC102725159 Gene

No disorders were found for LOC102725159 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102725159 Gene

Publications for LOC102725159 Gene

No publications were found for LOC102725159 Gene.

Products for LOC102725159 Gene

Sources for LOC102725159 Gene

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