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Aliases for LOC102724861 Gene

Subcategory (RNA class) for LOC102724861 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC102724861 Gene

  • Uncharacterized LOC102724861 3
  • AC012668.2 5

External Ids for LOC102724861 Gene

Previous GeneCards Identifiers for LOC102724861 Gene

  • GC02U902893

Summaries for LOC102724861 Gene

GeneCards Summary for LOC102724861 Gene

LOC102724861 (Uncharacterized LOC102724861) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724861 Gene

Genomics for LOC102724861 Gene

Regulatory Elements for LOC102724861 Gene

Enhancers for LOC102724861 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02G215526 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -3.7 -3688 6.3 FOXA2 PKNOX1 ARID4B TCF12 GATA2 FOS KAT8 MIER3 MAFF SMARCA4 ATIC LOC102724861 ENSG00000228618
GH02G215535 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.7 +3.9 3867 2.6 ELF3 CTCF FOXA2 SAP130 MLX CEBPG RARA SLC30A9 GATA3 GATA2 FN1 LOC102724861 ENSG00000234938
GH02G215540 1 Ensembl ENCODE dbSUPER 0.4 +7.7 7727 1.3 JUND JUN BHLHE40 FOS EP300 ENSG00000234938 LOC102724861
GH02G215498 1.2 Ensembl ENCODE 0.3 -34.5 -34506 1.1 FOXA2 MLX ARID4B DMAP1 ZNF48 SLC30A9 FOS ZNF263 SP5 MIER2 ENSG00000228618 LOC102724861
GH02G215504 1.2 Ensembl ENCODE 0.3 -27.4 -27373 2.3 FOXA2 ARNT ARID4B YY1 TCF12 GATA2 ZNF263 SP5 NCOA1 REST ENSG00000228618 LOC102724861
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC102724861 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC102724861 Gene

Chromosome:
2
Start:
215,533,133 bp from pter
End:
215,713,895 bp from pter
Size:
180,763 bases
Orientation:
Plus strand

Genomic View for LOC102724861 Gene

Genes around LOC102724861 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724861 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724861 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724861 Gene

Proteins for LOC102724861 Gene

Post-translational modifications for LOC102724861 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724861 Gene

Domains & Families for LOC102724861 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724861 Gene

Function for LOC102724861 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724861 Gene

Localization for LOC102724861 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC102724861 Gene

Pathways & Interactions for LOC102724861 Gene

SuperPathways for LOC102724861 Gene

No Data Available

Interacting Proteins for LOC102724861 Gene

Gene Ontology (GO) - Biological Process for LOC102724861 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724861 Gene

Drugs & Compounds for LOC102724861 Gene

No Compound Related Data Available

Transcripts for LOC102724861 Gene

mRNA/cDNA for LOC102724861 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724861 Gene

No ASD Table

Relevant External Links for LOC102724861 Gene

GeneLoc Exon Structure for
LOC102724861

Expression for LOC102724861 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC102724861 Gene

genes like me logo Genes that share expression patterns with LOC102724861: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724861 Gene

Orthologs for LOC102724861 Gene

Evolution for LOC102724861 Gene

ENSEMBL:
Gene Tree for LOC102724861 (if available)
TreeFam:
Gene Tree for LOC102724861 (if available)

No data available for Orthologs for LOC102724861 Gene

Paralogs for LOC102724861 Gene

No data available for Paralogs for LOC102724861 Gene

Variants for LOC102724861 Gene

Sequence variations from dbSNP and Humsavar for LOC102724861 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs1000001464 -- 215,563,905(+) TAATT(A/C)ATTCA intron-variant
rs1000031446 -- 215,636,558(+) AGTCT(C/G/T)TCTGC intron-variant
rs1000049572 -- 215,544,726(+) AGCCT(C/T)AGTAG upstream-variant-2KB
rs1000058257 -- 215,629,297(+) ATTCA(A/G)TCATT intron-variant
rs1000130702 -- 215,599,372(+) TTTAG(A/G)TAAAA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC102724861 Gene

Disorders for LOC102724861 Gene

No disorders were found for LOC102724861 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724861 Gene

Publications for LOC102724861 Gene

No publications were found for LOC102724861 Gene.

Products for LOC102724861 Gene

Sources for LOC102724861 Gene

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