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Aliases for LOC102724851 Gene

Subcategory (RNA class) for LOC102724851 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC102724851 Gene

  • Uncharacterized LOC102724851 3
  • RP11-457M11.5 5

External Ids for LOC102724851 Gene

Previous GeneCards Identifiers for LOC102724851 Gene

  • GC06U902560
  • GC06P026677
  • GC06P026679
  • GC06P026715
  • GC06P026742
  • GC06P026776

Summaries for LOC102724851 Gene

GeneCards Summary for LOC102724851 Gene

LOC102724851 (Uncharacterized LOC102724851) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724851 Gene

Genomics for LOC102724851 Gene

Regulatory Elements for LOC102724851 Gene

Enhancers for LOC102724851 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G026955 1 ENCODE 52.8 +285.8 285803 2.0 PKNOX1 CREB3L1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZNF143 FOS SP3 LOC102724851 HMGN4 BTN2A2 GUSBP2 LINC00240
GH06G027126 1.7 Ensembl ENCODE dbSUPER 26.4 +467.1 467050 23.0 CREB3L1 AGO1 FEZF1 DMAP1 YY1 ZNF143 ZNF263 SP3 NFYC TBX21 ABT1 ZKSCAN8 HMGN4 LOC102724851 ZNF322 HIST1H4K RNU2-62P ZNF204P BTN3A2 HIST1H3H
GH06G026534 1.7 Ensembl ENCODE dbSUPER 20.7 -133.9 -133899 5.0 CREB3L1 MLX AGO1 ZFP64 DMAP1 FEZF1 YY1 ZNF143 ZNF263 SP3 ABT1 BTN3A2 HMGN4 LOC102724851 BTN2A1 ZNF322 TRIM38 ZNF391 LINC00240 BTN3A3
GH06G026702 0.9 ENCODE 38.4 +30.6 30554 0.2 PKNOX1 ATF1 CREB3L1 ARNT GTF3C2 GATA2 KLF13 NCOA1 ZNF592 SMARCA4 LOC102724851 ABT1 BTN2A1 GC06P026847 GC06P026890
GH06G026567 1.7 Ensembl ENCODE dbSUPER 18.1 -100.4 -100447 5.3 CREB3L1 MLX ZFP64 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 SP3 BTN3A2 HMGN4 ABT1 LOC102724851 BTN2A1 HCG11 RNU6-502P HIST1H1D BTN1A1 HIST1H4H
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC102724851 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC102724851 Gene

Chromosome:
6
Start:
26,670,973 bp from pter
End:
26,687,964 bp from pter
Size:
16,992 bases
Orientation:
Plus strand

Genomic View for LOC102724851 Gene

Genes around LOC102724851 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724851 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724851 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724851 Gene

Proteins for LOC102724851 Gene

Post-translational modifications for LOC102724851 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724851 Gene

Domains & Families for LOC102724851 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724851 Gene

Function for LOC102724851 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724851 Gene

Localization for LOC102724851 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC102724851 Gene

Pathways & Interactions for LOC102724851 Gene

SuperPathways for LOC102724851 Gene

No Data Available

Interacting Proteins for LOC102724851 Gene

Gene Ontology (GO) - Biological Process for LOC102724851 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724851 Gene

Drugs & Compounds for LOC102724851 Gene

No Compound Related Data Available

Transcripts for LOC102724851 Gene

mRNA/cDNA for LOC102724851 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724851 Gene

No ASD Table

Relevant External Links for LOC102724851 Gene

GeneLoc Exon Structure for
LOC102724851

Expression for LOC102724851 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC102724851 Gene

genes like me logo Genes that share expression patterns with LOC102724851: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724851 Gene

Orthologs for LOC102724851 Gene

Evolution for LOC102724851 Gene

ENSEMBL:
Gene Tree for LOC102724851 (if available)
TreeFam:
Gene Tree for LOC102724851 (if available)

No data available for Orthologs for LOC102724851 Gene

Paralogs for LOC102724851 Gene

No data available for Paralogs for LOC102724851 Gene

Variants for LOC102724851 Gene

Sequence variations from dbSNP and Humsavar for LOC102724851 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1045415 -- 26,687,685(+) GAACC(A/G)GCCAA nc-transcript-variant
rs10456332 -- 26,685,903(+) ataaa(A/C)taaaa intron-variant, nc-transcript-variant
rs10456333 -- 26,687,313(+) ggatc(A/G)atgcc nc-transcript-variant
rs1052479 -- 26,672,597(+) TAAGT(G/T)GGTTG nc-transcript-variant
rs10711785 -- 26,680,982(+) AAATT(-/A)AAAAA intron-variant, nc-transcript-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC102724851 Gene

Disorders for LOC102724851 Gene

No disorders were found for LOC102724851 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724851 Gene

Publications for LOC102724851 Gene

No publications were found for LOC102724851 Gene.

Products for LOC102724851 Gene

Sources for LOC102724851 Gene

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