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Aliases for LOC102724149 Gene

Subcategory (RNA class) for LOC102724149 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC102724149 Gene

  • Uncharacterized LOC102724149 3

External Ids for LOC102724149 Gene

Previous GeneCards Identifiers for LOC102724149 Gene

  • GC13U901031

Summaries for LOC102724149 Gene

GeneCards Summary for LOC102724149 Gene

LOC102724149 (Uncharacterized LOC102724149) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102724149 Gene

Genomics for LOC102724149 Gene

Regulatory Elements for LOC102724149 Gene

Enhancers for LOC102724149 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G095297 1.9 FANTOM5 Ensembl ENCODE dbSUPER 0.7 -0.7 -717 5.6 HDGF FOXA2 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ABCC4 LOC102724149 GC13M095121
GH13G095298 1 Ensembl ENCODE 0.7 -3.9 -3932 0.2 CTCF TFAP4 SAP130 TEAD4 THRB RAD21 YY1 RFX5 TEAD3 SMC3 LOC102724149 GC13M095121
GH13G095285 1.5 Ensembl ENCODE dbSUPER 0.4 -14.5 -14530 1.4 ATF1 CREB3L1 ARNT TCF12 ZNF121 ZNF766 GATA2 NCOA1 SMARCB1 ZNF592 ABCC4 LOC102724149 GC13M095121
GH13G095296 0.8 ENCODE 0.7 -3.8 -3813 0.0 CTCF TFAP4 SAP130 TEAD4 THRB RAD21 YY1 RFX5 TEAD3 SMC3 LOC102724149 GC13M095121
GH13G095265 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -29.2 -29183 11.7 HDGF PKNOX1 FOXA2 CREB3L1 ARNT SIN3A FEZF1 ZNF766 FOS ZNF592 ABCC4 LOC102724149 GC13M095121
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC102724149 on UCSC Golden Path with GeneCards custom track

Promoters for LOC102724149 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000064658 568 1601 HDGF ATF1 CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 GLIS2 GATA2

Genomic Location for LOC102724149 Gene

Chromosome:
13
Start:
95,300,632 bp from pter
End:
95,310,874 bp from pter
Size:
10,243 bases
Orientation:
Plus strand

Genomic View for LOC102724149 Gene

Genes around LOC102724149 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102724149 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102724149 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102724149 Gene

Proteins for LOC102724149 Gene

Post-translational modifications for LOC102724149 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102724149 Gene

Domains & Families for LOC102724149 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102724149 Gene

Function for LOC102724149 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102724149 Gene

Localization for LOC102724149 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC102724149 Gene

Pathways & Interactions for LOC102724149 Gene

SuperPathways for LOC102724149 Gene

No Data Available

Interacting Proteins for LOC102724149 Gene

Gene Ontology (GO) - Biological Process for LOC102724149 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102724149 Gene

Drugs & Compounds for LOC102724149 Gene

No Compound Related Data Available

Transcripts for LOC102724149 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102724149 Gene

No ASD Table

Relevant External Links for LOC102724149 Gene

GeneLoc Exon Structure for
LOC102724149

No data available for mRNA/cDNA for LOC102724149 Gene

Expression for LOC102724149 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102724149 Gene

Orthologs for LOC102724149 Gene

No data available for Orthologs and Evolution for LOC102724149 Gene

Paralogs for LOC102724149 Gene

No data available for Paralogs for LOC102724149 Gene

Variants for LOC102724149 Gene

Sequence variations from dbSNP and Humsavar for LOC102724149 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000318721 -- 95,308,923(+) ACGAA(A/G)ATTAC intron-variant
rs1000650334 -- 95,305,671(+) GGTAA(A/G)ATGGG intron-variant
rs1001019384 -- 95,302,319(+) TGTGC(A/G)TTTCT nc-transcript-variant, upstream-variant-2KB
rs1001092532 -- 95,302,910(+) AGCCT(A/G)TGTCT intron-variant, upstream-variant-2KB
rs1001155178 -- 95,305,464(+) AGCTC(A/G)CACCT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC102724149 Gene

Disorders for LOC102724149 Gene

No disorders were found for LOC102724149 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102724149 Gene

Publications for LOC102724149 Gene

No publications were found for LOC102724149 Gene.

Products for LOC102724149 Gene

Sources for LOC102724149 Gene

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