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Aliases for LOC102723716 Gene

Subcategory (RNA class) for LOC102723716 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC102723716 Gene

  • Uncharacterized LOC102723716 3
  • RP11-350N15.3 5

External Ids for LOC102723716 Gene

Previous GeneCards Identifiers for LOC102723716 Gene

  • GC08U901862

Summaries for LOC102723716 Gene

GeneCards Summary for LOC102723716 Gene

LOC102723716 (Uncharacterized LOC102723716) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723716 Gene

Genomics for LOC102723716 Gene

Regulatory Elements for LOC102723716 Gene

Enhancers for LOC102723716 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G037603 1.5 Ensembl ENCODE dbSUPER 19.7 +799.4 799437 1.2 PKNOX1 FOXA2 ATF1 MLX ZNF493 ZNF133 ARID4B DMAP1 ZNF2 ZNF48 DDHD2 LOC102723716 ENSG00000255201 RPS20P22 LOC105379379 LINC01605 ZNF703 ENSG00000253388 ENSG00000254290 ENSG00000254306
GH08G038379 1.8 FANTOM5 ENCODE dbSUPER 12 +20.4 20408 8.1 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 ZNF548 ZNF263 SP3 NFYC TBX21 DDHD2 RPS20P22 LETM2 LOC102723716 ENSG00000255201 TACC1 NSD3 ENSG00000272092
GH08G038764 2 FANTOM5 Ensembl ENCODE dbSUPER 9.8 -364.5 -364457 7.5 HDGF HNRNPUL1 FOXA2 PKNOX1 WRNIP1 ARID4B SIN3A YBX1 FEZF1 ZNF2 DDHD2 TACC1 ENSG00000255201 LETM2 EIF4EBP1 FGFR1 LOC102723716 PLEKHA2 C8orf86 NSD3
GH08G037693 1.6 Ensembl ENCODE dbSUPER 11.7 +706.4 706371 7.9 HDGF PKNOX1 FOXA2 ARNT SIN3A ARID4B DMAP1 FEZF1 ZNF2 YY1 ENSG00000255201 DDHD2 RPS20P22 LOC102723716 LOC728024 ZNF703 LOC101929622
GH08G037840 1.6 Ensembl ENCODE dbSUPER 11.7 +561.1 561056 4.0 ARNT AGO1 ARID4B DMAP1 FEZF1 ZNF2 ZNF302 ZNF548 DEK ZNF263 DDHD2 ENSG00000255201 RPS20P22 ADGRA2 LOC102723716 RAB11FIP1 GOT1L1 RNU6-323P LOC728024 BRF2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC102723716 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC102723716 Gene

Chromosome:
8
Start:
38,400,416 bp from pter
End:
38,403,940 bp from pter
Size:
3,525 bases
Orientation:
Minus strand

Genomic View for LOC102723716 Gene

Genes around LOC102723716 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723716 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723716 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723716 Gene

Proteins for LOC102723716 Gene

Post-translational modifications for LOC102723716 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723716 Gene

Domains & Families for LOC102723716 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723716 Gene

Function for LOC102723716 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723716 Gene

Localization for LOC102723716 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC102723716 Gene

Pathways & Interactions for LOC102723716 Gene

SuperPathways for LOC102723716 Gene

No Data Available

Interacting Proteins for LOC102723716 Gene

Gene Ontology (GO) - Biological Process for LOC102723716 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723716 Gene

Drugs & Compounds for LOC102723716 Gene

No Compound Related Data Available

Transcripts for LOC102723716 Gene

mRNA/cDNA for LOC102723716 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723716 Gene

No ASD Table

Relevant External Links for LOC102723716 Gene

GeneLoc Exon Structure for
LOC102723716

Expression for LOC102723716 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC102723716 Gene

genes like me logo Genes that share expression patterns with LOC102723716: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC102723716 Gene

Orthologs for LOC102723716 Gene

Evolution for LOC102723716 Gene

ENSEMBL:
Gene Tree for LOC102723716 (if available)
TreeFam:
Gene Tree for LOC102723716 (if available)

No data available for Orthologs for LOC102723716 Gene

Paralogs for LOC102723716 Gene

No data available for Paralogs for LOC102723716 Gene

Variants for LOC102723716 Gene

Sequence variations from dbSNP and Humsavar for LOC102723716 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1000365460 -- 38,402,697(+) TACAA(C/T)ATGCA intron-variant, upstream-variant-2KB
rs1000633807 -- 38,402,167(+) AAATG(C/G)TACAT intron-variant, nc-transcript-variant
rs1002235766 -- 38,403,812(+) GAAGC(C/T)TTGTG intron-variant, upstream-variant-2KB
rs1002309531 -- 38,403,573(+) TCAAT(A/G)CTTTA intron-variant, upstream-variant-2KB
rs1003144902 -- 38,399,950(+) CAAAA(-/AGAGAGAGAG)AGAGA intron-variant, downstream-variant-500B

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC102723716 Gene

Disorders for LOC102723716 Gene

No disorders were found for LOC102723716 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723716 Gene

Publications for LOC102723716 Gene

No publications were found for LOC102723716 Gene.

Products for LOC102723716 Gene

Sources for LOC102723716 Gene

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