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Aliases for LOC102723591 Gene

Subcategory (RNA class) for LOC102723591 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC102723591 Gene

  • Uncharacterized LOC102723591 3
  • U52111.14 5

External Ids for LOC102723591 Gene

Previous GeneCards Identifiers for LOC102723591 Gene

  • GC0XU901963

Summaries for LOC102723591 Gene

GeneCards Summary for LOC102723591 Gene

LOC102723591 (Uncharacterized LOC102723591) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC102723591 Gene

Genomics for LOC102723591 Gene

Regulatory Elements for LOC102723591 Gene

Enhancers for LOC102723591 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XF153764 1 ENCODE 16 +0.8 821 3.3 HDGF PKNOX1 ARID4B SIN3A ZNF2 YY1 ZNF143 FOS ZNF263 SP3 LOC102723591 PLXNB3
GH0XF153900 1.4 FANTOM5 Ensembl ENCODE 13.1 -136.4 -136423 5.4 HDGF HDAC1 ZFP64 KLF17 GLI4 ZBTB40 GLIS2 EGR1 GATA2 FOS SNORA70 TMEM187 EMD PLXNB3 LOC102723591 SNORA56 HCFC1 ENSG00000261773 LOC105373383 PLXNA3
GH0XF153730 1.4 FANTOM5 Ensembl ENCODE 12.9 +34.8 34819 2.8 SOX13 GATAD2A SOX5 CBX3 IRF2 SAP130 HLF JUNB CEBPB CEBPG PNCK LOC102723591 PLXNB3 SLC6A8 ABCD1 MECP2 TMEM187 IKBKG ARHGAP4 IRAK1
GH0XF153741 1 Ensembl ENCODE 12.5 +22.8 22811 3.5 CTCF HDAC1 KLF1 PKNOX1 RAD21 ZFHX2 POLR2A RNF2 NRF1 REST PNCK LOC102723591 CH17-340M24.3 ABCD1 PLXNB3
GH0XF153886 0.5 FANTOM5 ENCODE 11.9 -120.5 -120490 1.3 ZNF263 KLF1 MAZ ZIC2 GATA3 GATA2 ZBTB48 IKZF1 EZH2 EGR2 RENBP TMEM187 PDZD4 IDH3G SSR4 SRPK3 PLXNB3 ARHGAP4 NAA10 ABCD1
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around LOC102723591 on UCSC Golden Path with GeneCards custom track

Promoters for LOC102723591 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000261973 678 1601 GLIS2 GATA2 FOS JUNB NCOA1 REST CREB3 MBD2 SMARCA4 GLIS1

Genomic Location for LOC102723591 Gene

Chromosome:
X
Start:
153,735,626 bp from pter
End:
153,766,478 bp from pter
Size:
30,853 bases
Orientation:
Minus strand

Genomic View for LOC102723591 Gene

Genes around LOC102723591 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC102723591 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC102723591 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC102723591 Gene

Proteins for LOC102723591 Gene

Post-translational modifications for LOC102723591 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC102723591 Gene

Domains & Families for LOC102723591 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC102723591 Gene

Function for LOC102723591 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC102723591 Gene

Localization for LOC102723591 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC102723591 Gene

Pathways & Interactions for LOC102723591 Gene

SuperPathways for LOC102723591 Gene

No Data Available

Interacting Proteins for LOC102723591 Gene

Gene Ontology (GO) - Biological Process for LOC102723591 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC102723591 Gene

Transcripts for LOC102723591 Gene

mRNA/cDNA for LOC102723591 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC102723591 Gene

No ASD Table

Relevant External Links for LOC102723591 Gene

GeneLoc Exon Structure for
LOC102723591

Expression for LOC102723591 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for LOC102723591 Gene

Orthologs for LOC102723591 Gene

Evolution for LOC102723591 Gene

ENSEMBL:
Gene Tree for LOC102723591 (if available)
TreeFam:
Gene Tree for LOC102723591 (if available)

No data available for Orthologs for LOC102723591 Gene

Paralogs for LOC102723591 Gene

No data available for Paralogs for LOC102723591 Gene

Variants for LOC102723591 Gene

Sequence variations from dbSNP and Humsavar for LOC102723591 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs111247447 -- 153,767,244(+) GGCGT(A/G)TGTGA upstream-variant-2KB, reference, synonymous-codon
rs111409994 -- 153,766,588(+) AAGTA(C/G)GAGAT intron-variant, upstream-variant-2KB
rs111744145 -- 153,765,936(+) CCAGG(C/T)ACACC intron-variant
rs112012787 -- 153,761,401(+) CAGGC(C/T)CACGG downstream-variant-500B
rs112274376 -- 153,767,307(+) GGTGA(C/T)GGGCA upstream-variant-2KB, reference, synonymous-codon

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC102723591 Gene

Disorders for LOC102723591 Gene

No disorders were found for LOC102723591 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC102723591 Gene

Publications for LOC102723591 Gene

No publications were found for LOC102723591 Gene.

Products for LOC102723591 Gene

Sources for LOC102723591 Gene

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