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Aliases for LOC101930114 Gene

Subcategory (RNA class) for LOC101930114 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101930114 Gene

  • Uncharacterized LOC101930114 3
  • AL031316.1 5

External Ids for LOC101930114 Gene

Previous GeneCards Identifiers for LOC101930114 Gene

  • GC01U903891
  • GC01M209835

Summaries for LOC101930114 Gene

GeneCards Summary for LOC101930114 Gene

LOC101930114 (Uncharacterized LOC101930114) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101930114 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101930114 Gene

Genomics for LOC101930114 Gene

GeneHancer (GH) Regulatory Elements for LOC101930114 Gene

Promoters and enhancers for LOC101930114 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I209754 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 550.8 +0.5 523 5.1 PKNOX1 BACH1 EBF1 YBX1 ZIC2 POLR2A SCRT2 ATF7 ETV6 IKZF2 TRAF3IP3 LOC101930114 G0S2 IRF6 C1orf74
GH01I209822 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 10.4 -68.2 -68163 6.5 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 DIEXF IRF6 SYT14 C1orf74 LOC101930114 TRAF3IP3
GH01I209644 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 11.1 +104.6 104605 16.6 HDGF FOXA2 PKNOX1 SMAD1 ARNT FEZF1 IRF4 YY1 ZNF766 FOS LAMB3 G0S2 HSD11B1 LOC101930114 CAMK1G ENSG00000224260 MIR205 MIR205HG IRF6 TRAF3IP3
GH01I209814 Enhancer 1.5 VISTA FANTOM5 ENCODE dbSUPER 10.4 -58.5 -58498 3.9 CTCF SOX5 GATAD2A ZNF687 ZSCAN4 EBF1 MNT GABPA ETV4 TCF7 IRF6 C1orf74 LOC101930114 SYT14 LAMB3 DIEXF
GH01I209672 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 6.3 +83.1 83148 4.2 HDGF PKNOX1 SMAD1 MLX FEZF1 IRF4 YY1 POLR2B ZNF766 ZNF548 G0S2 GC01P209677 GC01P209676 DIEXF LOC101930114 LAMB3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101930114 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101930114 Gene

Genomic Locations for LOC101930114 Gene
chr1:209,661,359-209,757,599
(GRCh38/hg38)
Size:
96,241 bases
Orientation:
Minus strand
chr1:209,834,709-209,897,470
(GRCh37/hg19)

Genomic View for LOC101930114 Gene

Genes around LOC101930114 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101930114 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101930114 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101930114 Gene

Proteins for LOC101930114 Gene

Post-translational modifications for LOC101930114 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101930114 Gene

Domains & Families for LOC101930114 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101930114 Gene

Function for LOC101930114 Gene

Phenotypes From GWAS Catalog for LOC101930114 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101930114 Gene

Localization for LOC101930114 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101930114 Gene

Pathways & Interactions for LOC101930114 Gene

SuperPathways for LOC101930114 Gene

No Data Available

Interacting Proteins for LOC101930114 Gene

Gene Ontology (GO) - Biological Process for LOC101930114 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101930114 Gene

Drugs & Compounds for LOC101930114 Gene

No Compound Related Data Available

Transcripts for LOC101930114 Gene

mRNA/cDNA for LOC101930114 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101930114 Gene

No ASD Table

Relevant External Links for LOC101930114 Gene

GeneLoc Exon Structure for
LOC101930114

Expression for LOC101930114 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101930114 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101930114 Gene

This gene is overexpressed in Adipose - Subcutaneous (x9.5), Adipose - Visceral (Omentum) (x9.1), and Breast - Mammary Tissue (x4.7).
genes like me logo Genes that share expression patterns with LOC101930114: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101930114 Gene

Orthologs for LOC101930114 Gene

Evolution for LOC101930114 Gene

ENSEMBL:
Gene Tree for LOC101930114 (if available)
TreeFam:
Gene Tree for LOC101930114 (if available)

No data available for Orthologs for LOC101930114 Gene

Paralogs for LOC101930114 Gene

No data available for Paralogs for LOC101930114 Gene

Variants for LOC101930114 Gene

Sequence variations from dbSNP and Humsavar for LOC101930114 Gene

SNP ID Clin Chr 01 pos Variation AA Info Type
rs12086634 uncertain-significance, Cortisone reductase deficiency 2 209,706,914(-) T/G genic_upstream_transcript_variant, intron_variant
rs387907168 pathogenic, Cortisone reductase deficiency 2 209,707,020(-) C/T genic_upstream_transcript_variant, intron_variant
rs45487298 uncertain-significance, Cortisone reductase deficiency 2 209,706,872(-) AA/AAA genic_upstream_transcript_variant, intron_variant
rs41283132 likely-benign, not specified 209,734,386(-) G/A/C genic_upstream_transcript_variant, intron_variant
rs1000051536 -- 209,677,913(-) T/C genic_upstream_transcript_variant, intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101930114 Gene

Disorders for LOC101930114 Gene

Additional Disease Information for LOC101930114

No disorders were found for LOC101930114 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101930114 Gene

Publications for LOC101930114 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 58

Products for LOC101930114 Gene

Sources for LOC101930114 Gene

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