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Aliases for LOC101930114 Gene

Subcategory (RNA class) for LOC101930114 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101930114 Gene

  • Uncharacterized LOC101930114 3
  • RP1-28O10.1 5

External Ids for LOC101930114 Gene

Previous GeneCards Identifiers for LOC101930114 Gene

  • GC01U903891
  • GC01M209835

Summaries for LOC101930114 Gene

GeneCards Summary for LOC101930114 Gene

LOC101930114 (Uncharacterized LOC101930114) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101930114 Gene

Genomics for LOC101930114 Gene

Regulatory Elements for LOC101930114 Gene

Enhancers for LOC101930114 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01G209644 2.1 FANTOM5 Ensembl ENCODE dbSUPER 11.1 +104.6 104605 16.6 CREB3L1 MLX DMAP1 FEZF1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC G0S2 LAMB3 HSD11B1 LOC101930114 CAMK1G ENSG00000224260 MIR205 MIR205HG IRF6 TRAF3IP3
GH01G209814 1.8 VISTA FANTOM5 ENCODE dbSUPER 10.4 -58.5 -58499 3.9 SOX5 GATAD2A CTCF ZNF654 ZSCAN4 MNT REST ZNF501 EBF1 RAD21 IRF6 C1orf74 LOC101930114 SYT14 LAMB3 DIEXF
GH01G209822 1.6 Ensembl ENCODE dbSUPER 10.4 -68.1 -68094 6.3 HDGF PKNOX1 CREB3L1 ARNT WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 IRF6 DIEXF SYT14 C1orf74 LOC101930114 TRAF3IP3
GH01G209627 1.4 Ensembl ENCODE dbSUPER 11 +129.9 129879 1.1 RB1 KLF17 FEZF1 ZNF2 RAD21 YY1 GLIS2 CBX5 ZNF366 EGR1 ENSG00000224260 G0S2 LOC101930114 HSD11B1 LAMB3 MIR4260
GH01G209641 1.3 Ensembl ENCODE dbSUPER 10.8 +114.8 114769 3.4 BCOR CTCF ESRRA ZSCAN4 MAX ZMYM3 ZBTB40 RAD21 YY1 FOSL1 G0S2 LAMB3 HSD11B1 LOC101930114 CAMK1G ENSG00000224260 MIR4260
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101930114 on UCSC Golden Path with GeneCards custom track

Promoters for LOC101930114 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000019416 399 401 MXI1 POLR2A NR2F1 ETV6 DPF2 IKZF2 SPI1

Genomic Location for LOC101930114 Gene

Chromosome:
1
Start:
209,661,359 bp from pter
End:
209,757,599 bp from pter
Size:
96,241 bases
Orientation:
Minus strand

Genomic View for LOC101930114 Gene

Genes around LOC101930114 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101930114 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101930114 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101930114 Gene

Proteins for LOC101930114 Gene

Post-translational modifications for LOC101930114 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101930114 Gene

Domains & Families for LOC101930114 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101930114 Gene

Function for LOC101930114 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101930114 Gene

Localization for LOC101930114 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC101930114 Gene

Pathways & Interactions for LOC101930114 Gene

SuperPathways for LOC101930114 Gene

No Data Available

Interacting Proteins for LOC101930114 Gene

Gene Ontology (GO) - Biological Process for LOC101930114 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101930114 Gene

Drugs & Compounds for LOC101930114 Gene

No Compound Related Data Available

Transcripts for LOC101930114 Gene

mRNA/cDNA for LOC101930114 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101930114 Gene

No ASD Table

Relevant External Links for LOC101930114 Gene

GeneLoc Exon Structure for
LOC101930114

Expression for LOC101930114 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101930114 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101930114 Gene

This gene is overexpressed in Adipose - Subcutaneous (x9.5), Adipose - Visceral (Omentum) (x9.1), and Breast - Mammary Tissue (x4.7).
genes like me logo Genes that share expression patterns with LOC101930114: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101930114 Gene

Orthologs for LOC101930114 Gene

Evolution for LOC101930114 Gene

ENSEMBL:
Gene Tree for LOC101930114 (if available)
TreeFam:
Gene Tree for LOC101930114 (if available)

No data available for Orthologs for LOC101930114 Gene

Paralogs for LOC101930114 Gene

No data available for Paralogs for LOC101930114 Gene

Variants for LOC101930114 Gene

Sequence variations from dbSNP and Humsavar for LOC101930114 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs387907168 Pathogenic 209,707,020(+) ATGTG(C/T)GCAAA intron-variant, reference, missense
rs12086634 Uncertain significance 209,706,914(+) CCAGA(G/T)GATTT intron-variant
rs45487298 Uncertain significance 209,706,873(+) ACCAA(-/A/G)GAGCT intron-variant
rs1000051536 -- 209,677,913(+) ATTAC(C/T)CTTCC intron-variant
rs1000057637 -- 209,716,811(+) GAAAG(A/G)ACAGT intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC101930114 Gene

Disorders for LOC101930114 Gene

Relevant External Links for LOC101930114

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101930114

No disorders were found for LOC101930114 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101930114 Gene

Publications for LOC101930114 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo M.F. … Soares M.B. (Genome Res. 1996) 3 64

Products for LOC101930114 Gene

Sources for LOC101930114 Gene

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