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Aliases for LOC101929532 Gene

Subcategory (RNA class) for LOC101929532 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101929532 Gene

  • Uncharacterized LOC101929532 3
  • AC007750.5 5

External Ids for LOC101929532 Gene

Previous GeneCards Identifiers for LOC101929532 Gene

  • GC02U902687

Summaries for LOC101929532 Gene

GeneCards Summary for LOC101929532 Gene

LOC101929532 (Uncharacterized LOC101929532) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929532 Gene

Genomics for LOC101929532 Gene

Regulatory Elements for LOC101929532 Gene

Enhancers for LOC101929532 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F162196 0.2 ENCODE 11 +83.9 83928 3.5 JUND HLF FOS MAFK NFE2L2 FAP LOC101929532 GCG
GH02F162231 0.7 Ensembl ENCODE 10.8 +118.7 118731 2.7 BHLHE40 FOS LOC101929532 FAP GCG
GH02F162265 1.1 ENCODE 10.5 +151.9 151899 1.3 CTCF CTBP1 FOS LOC101929532 FAP GC02P162270 LOC105373724
GH02F161981 0.6 ENCODE 10.3 -132.4 -132395 1.1 SMARCA4 REST EZH2 LOC101929532 RPEP5 LOC105373723
GH02F162301 0.2 Ensembl 9.1 +186.7 186660 0.2 CTCF PKNOX1 L3MBTL2 TEAD1 NRF1 TRIM22 HOMEZ KAT8 LOC101929532 GC02M162307 GC02P162270
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around LOC101929532 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC101929532 Gene

Chromosome:
2
Start:
162,114,441 bp from pter
End:
162,173,223 bp from pter
Size:
58,783 bases
Orientation:
Plus strand

Genomic View for LOC101929532 Gene

Genes around LOC101929532 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929532 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929532 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929532 Gene

Proteins for LOC101929532 Gene

Post-translational modifications for LOC101929532 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929532 Gene

Domains & Families for LOC101929532 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929532 Gene

Function for LOC101929532 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929532 Gene

Localization for LOC101929532 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC101929532 Gene

Pathways & Interactions for LOC101929532 Gene

SuperPathways for LOC101929532 Gene

No Data Available

Interacting Proteins for LOC101929532 Gene

Gene Ontology (GO) - Biological Process for LOC101929532 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929532 Gene

Transcripts for LOC101929532 Gene

mRNA/cDNA for LOC101929532 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929532 Gene

No ASD Table

Relevant External Links for LOC101929532 Gene

GeneLoc Exon Structure for
LOC101929532

Expression for LOC101929532 Gene

mRNA expression in normal human tissues for LOC101929532 Gene

genes like me logo Genes that share expression patterns with LOC101929532: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for LOC101929532 Gene

Orthologs for LOC101929532 Gene

Evolution for LOC101929532 Gene

ENSEMBL:
Gene Tree for LOC101929532 (if available)
TreeFam:
Gene Tree for LOC101929532 (if available)

No data available for Orthologs for LOC101929532 Gene

Paralogs for LOC101929532 Gene

No data available for Paralogs for LOC101929532 Gene

Variants for LOC101929532 Gene

Sequence variations from dbSNP and Humsavar for LOC101929532 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10164435 -- 162,151,238(+) AGAAA(C/G)ATTAA intron-variant
rs10165543 -- 162,132,571(+) TTTTT(A/T)AAATC intron-variant
rs10170813 -- 162,158,954(+) GAGTT(C/T)AATAT intron-variant
rs10171070 -- 162,118,368(+) ACTAA(C/T)CATTC intron-variant
rs10171915 -- 162,118,993(+) TGAAG(G/T)GGAGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for LOC101929532 Gene

Variant ID Type Subtype PubMed ID
nsv508117 OTHER sequence alteration 20534489
nsv834439 CNV gain 17160897
nsv834440 CNV gain 17160897

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for LOC101929532 Gene

Disorders for LOC101929532 Gene

Relevant External Links for LOC101929532

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101929532

No disorders were found for LOC101929532 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101929532 Gene

Publications for LOC101929532 Gene

No publications were found for LOC101929532 Gene.

Products for LOC101929532 Gene

Sources for LOC101929532 Gene

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