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Aliases for LOC101929243 Gene

Subcategory (RNA class) for LOC101929243 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101929243 Gene

  • Uncharacterized LOC101929243 3
  • AL451165.2 5

External Ids for LOC101929243 Gene

Previous GeneCards Identifiers for LOC101929243 Gene

  • GC06U902349
  • GC06P037314
  • GC06P034932
  • GC06P035538
  • GC06P037805
  • GC06P038458
  • GC06P039047
  • GC06P039636

Summaries for LOC101929243 Gene

GeneCards Summary for LOC101929243 Gene

LOC101929243 (Uncharacterized LOC101929243) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101929243 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929243 Gene

Genomics for LOC101929243 Gene

Regulatory Elements for LOC101929243 Gene

Enhancers for LOC101929243 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H034694 1.4 ENCODE dbSUPER 0.7 -0.1 -61 3 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 TAF11 LEMD2 UHRF1BP1 RPL10A ZNF76 RPS10 ENSG00000219023 SNRPC RPL35P2 FANCE
GH06H034690 0.6 dbSUPER 0.7 -4.5 -4502 2 SCRT1 HLF OVOL3 PRDM6 ZNF547 SCRT2 ZNF524 ZNF24 MLLT1 NFE2 UHRF1BP1 LOC101929243 LOC105375028
GH06H034693 0.4 Ensembl 0.7 -2.8 -2817 0 CEBPB ZBTB33 LOC101929243 LOC105375028
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101929243 on UCSC Golden Path with GeneCards custom track

Promoters for LOC101929243 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000195977 183 2201 HDGF PKNOX1 ARNT ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 ZNF766

Genomic Location for LOC101929243 Gene

Chromosome:
6
Start:
34,696,317 bp from pter
End:
34,697,471 bp from pter
Size:
1,155 bases
Orientation:
Plus strand

Genomic View for LOC101929243 Gene

Genes around LOC101929243 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929243 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929243 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929243 Gene

Proteins for LOC101929243 Gene

Post-translational modifications for LOC101929243 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929243 Gene

Domains & Families for LOC101929243 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929243 Gene

Function for LOC101929243 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929243 Gene

Localization for LOC101929243 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101929243 Gene

Pathways & Interactions for LOC101929243 Gene

SuperPathways for LOC101929243 Gene

No Data Available

Interacting Proteins for LOC101929243 Gene

Gene Ontology (GO) - Biological Process for LOC101929243 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929243 Gene

Drugs & Compounds for LOC101929243 Gene

No Compound Related Data Available

Transcripts for LOC101929243 Gene

mRNA/cDNA for LOC101929243 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929243 Gene

No ASD Table

Relevant External Links for LOC101929243 Gene

GeneLoc Exon Structure for
LOC101929243

Expression for LOC101929243 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929243 Gene

mRNA differential expression in normal tissues according to GTEx for LOC101929243 Gene

This gene is overexpressed in Muscle - Skeletal (x4.0).
genes like me logo Genes that share expression patterns with LOC101929243: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929243 Gene

Orthologs for LOC101929243 Gene

Evolution for LOC101929243 Gene

ENSEMBL:
Gene Tree for LOC101929243 (if available)
TreeFam:
Gene Tree for LOC101929243 (if available)

No data available for Orthologs for LOC101929243 Gene

Paralogs for LOC101929243 Gene

No data available for Paralogs for LOC101929243 Gene

Variants for LOC101929243 Gene

Sequence variations from dbSNP and Humsavar for LOC101929243 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000229661 -- 34,694,659(+) CCAGT(A/C)AAAGA intron-variant, upstream-variant-2KB
rs1000565252 -- 34,696,397(+) CCCCT(A/C)GGGGC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1000667638 -- 34,695,874(+) TCACC(C/T)CCTTT intron-variant, upstream-variant-2KB
rs1001703648 -- 34,696,971(+) GACCT(A/C)ACCGC intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001887467 -- 34,695,224(+) ATAAA(A/C)GAGAG intron-variant, upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC101929243 Gene

Disorders for LOC101929243 Gene

Relevant External Links for LOC101929243

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
LOC101929243

No disorders were found for LOC101929243 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for LOC101929243 Gene

Publications for LOC101929243 Gene

  1. Normalization and subtraction: two approaches to facilitate gene discovery. (PMID: 8889548) Bonaldo MF … Soares MB (Genome research 1996) 3 60

Products for LOC101929243 Gene

Sources for LOC101929243 Gene

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