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Aliases for LOC101929021 Gene

Subcategory (RNA class) for LOC101929021 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for LOC101929021 Gene

  • Uncharacterized LOC101929021 3
  • RP11-343J3.2 5

External Ids for LOC101929021 Gene

Previous GeneCards Identifiers for LOC101929021 Gene

  • GC10U901649

Summaries for LOC101929021 Gene

GeneCards Summary for LOC101929021 Gene

LOC101929021 (Uncharacterized LOC101929021) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101929021 Gene

Genomics for LOC101929021 Gene

Regulatory Elements for LOC101929021 Gene

Enhancers for LOC101929021 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G069507 1.1 dbSUPER 11.2 -66.5 -66488 0.5 HDGF CREB3L1 FEZF1 ZNF2 KLF13 REST ZNF592 ZNF610 SMARCA4 GLIS1 LOC101929021 NEUROG3 C10orf35 TMEM256P1 GC10M069447
GH10G069490 1.1 ENCODE dbSUPER 11.2 -77.5 -77483 9.1 PKNOX1 RAD21 ZNF23 GATA2 SCRT2 ZSCAN5C ZMIZ1 FOS EGR2 SMARCA5 TSPAN15 LOC101929021 NEUROG3 C10orf35 TMEM256P1 GC10M069447
GH10G069637 0.7 ENCODE 11.3 +64.1 64100 0.2 CTCF MAZ ZNF654 RBBP5 RAD21 ZNF560 ZNF335 POLR2A ZNF692 PATZ1 LOC101929021 NEUROG3 COL13A1 LOC102723350 C10orf35 LOC105378346
GH10G069501 0.7 dbSUPER 11.2 -70.2 -70206 1.8 RBBP5 ZNF398 ZBTB8A OSR2 ZNF664 ZNF589 ZFHX2 PATZ1 ZNF24 PRDM10 TSPAN15 LOC101929021 NEUROG3 C10orf35 TMEM256P1 GC10M069447
GH10G069538 0.4 FANTOM5 12.2 -34.3 -34323 0.2 POLR2A HK1 LOC101929021 NEUROG3 C10orf35 LOC105378345 TMEM256P1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around LOC101929021 on UCSC Golden Path with GeneCards custom track

Genomic Location for LOC101929021 Gene

Chromosome:
10
Start:
69,572,980 bp from pter
End:
69,577,154 bp from pter
Size:
4,175 bases
Orientation:
Plus strand

Genomic View for LOC101929021 Gene

Genes around LOC101929021 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101929021 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101929021 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101929021 Gene

Proteins for LOC101929021 Gene

Post-translational modifications for LOC101929021 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101929021 Gene

Domains & Families for LOC101929021 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101929021 Gene

Function for LOC101929021 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101929021 Gene

Localization for LOC101929021 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for LOC101929021 Gene

Pathways & Interactions for LOC101929021 Gene

SuperPathways for LOC101929021 Gene

No Data Available

Interacting Proteins for LOC101929021 Gene

Gene Ontology (GO) - Biological Process for LOC101929021 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101929021 Gene

Drugs & Compounds for LOC101929021 Gene

No Compound Related Data Available

Transcripts for LOC101929021 Gene

mRNA/cDNA for LOC101929021 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101929021 Gene

No ASD Table

Relevant External Links for LOC101929021 Gene

GeneLoc Exon Structure for
LOC101929021

Expression for LOC101929021 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for LOC101929021 Gene

genes like me logo Genes that share expression patterns with LOC101929021: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101929021 Gene

Orthologs for LOC101929021 Gene

Evolution for LOC101929021 Gene

ENSEMBL:
Gene Tree for LOC101929021 (if available)
TreeFam:
Gene Tree for LOC101929021 (if available)

No data available for Orthologs for LOC101929021 Gene

Paralogs for LOC101929021 Gene

No data available for Paralogs for LOC101929021 Gene

Variants for LOC101929021 Gene

Sequence variations from dbSNP and Humsavar for LOC101929021 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs121917837 Pathogenic 69,572,725(-) CCCTG(A/C)GCGGT upstream-variant-2KB, reference, missense
rs121917838 Pathogenic 69,572,766(-) CGAGC(G/T)CAATC upstream-variant-2KB, reference, missense
rs4536103 Likely benign 69,572,448(+) CGGAA(A/G)AGGTG upstream-variant-2KB, reference, missense
rs41277236 Benign 69,572,545(+) GTCCC(C/T)GGGGG upstream-variant-2KB, reference, missense
rs1000109821 -- 69,575,685(+) AAATA(C/G)AGGAA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for LOC101929021 Gene

Disorders for LOC101929021 Gene

No disorders were found for LOC101929021 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101929021 Gene

Publications for LOC101929021 Gene

No publications were found for LOC101929021 Gene.

Products for LOC101929021 Gene

Sources for LOC101929021 Gene

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