Free for academic non-profit institutions. Other users need a Commercial license

Aliases for LOC101928875 Gene

Subcategory (RNA class) for LOC101928875 Gene

ncRNA

Quality Score for this RNA gene is

1

Aliases for LOC101928875 Gene

  • Uncharacterized LOC101928875 3

External Ids for LOC101928875 Gene

Previous GeneCards Identifiers for LOC101928875 Gene

  • GC11U902006

Summaries for LOC101928875 Gene

GeneCards Summary for LOC101928875 Gene

LOC101928875 (Uncharacterized LOC101928875) is an RNA Gene, and is affiliated with the ncRNA class.

Additional gene information for LOC101928875 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for LOC101928875 Gene

Genomics for LOC101928875 Gene

GeneHancer (GH) Regulatory Elements for LOC101928875 Gene

Promoters and enhancers for LOC101928875 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I114152 Enhancer 2.2 UCNEbase FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.8 10845 22.1 FOXA2 SMAD1 ARNT ARID4B FEZF1 ZNF2 YY1 CBX5 ZNF213 E2F8 ENSG00000270179 ZBTB16 NNMT LOC105369499 TTC12 ZW10 CLDN25 LOC101928875 GC11M114060
GH11I114174 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.1 -7145 13.7 FOXA2 RAD21 YY1 ZSCAN5C ATF7 ZNF654 RXRA REST NR2F2 ZNF610 NNMT HTR3A ZBTB16 LOC101928875 PIR38575
GH11I114194 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 -22.9 -22929 5.1 INSM2 KLF17 FEZF1 RAD21 GLIS2 ZNF366 RXRA USF2 CEBPB REST PIR38575 LOC101928875 ZBTB16
GH11I114146 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.3 +25.0 25033 5 HDAC1 FEZF1 YY1 CHAMP1 TCF12 GATA2 ETV6 RXRA CEBPB MEF2D NNMT LOC101928875 GC11M114060 ZBTB16
GH11I114143 Enhancer 1.2 UCNEbase ENCODE dbSUPER 0.3 +32.0 31962 0.4 PKNOX1 GFI1B FEZF1 ZNF488 OSR2 ZSCAN21 CTBP1 PRDM6 ZNF366 SCRT2 LOC101928875 ZBTB16 GC11M114060
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around LOC101928875 on UCSC Golden Path with GeneCards custom track

Genomic Locations for LOC101928875 Gene

Genomic Locations for LOC101928875 Gene
chr11:114,158,509-114,174,468
(GRCh38/hg38)
Size:
15,960 bases
Orientation:
Minus strand

Genomic View for LOC101928875 Gene

Genes around LOC101928875 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
LOC101928875 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for LOC101928875 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for LOC101928875 Gene

Proteins for LOC101928875 Gene

Post-translational modifications for LOC101928875 Gene

No Post-translational modifications

No data available for DME Specific Peptides for LOC101928875 Gene

Domains & Families for LOC101928875 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for LOC101928875 Gene

Function for LOC101928875 Gene

Phenotypes From GWAS Catalog for LOC101928875 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for LOC101928875 Gene

Localization for LOC101928875 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for LOC101928875 Gene

Pathways & Interactions for LOC101928875 Gene

SuperPathways for LOC101928875 Gene

No Data Available

Interacting Proteins for LOC101928875 Gene

Gene Ontology (GO) - Biological Process for LOC101928875 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for LOC101928875 Gene

Drugs & Compounds for LOC101928875 Gene

No Compound Related Data Available

Transcripts for LOC101928875 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for LOC101928875 Gene

No ASD Table

Relevant External Links for LOC101928875 Gene

GeneLoc Exon Structure for
LOC101928875

No data available for mRNA/cDNA for LOC101928875 Gene

Expression for LOC101928875 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for LOC101928875 Gene

Orthologs for LOC101928875 Gene

No data available for Orthologs and Evolution for LOC101928875 Gene

Paralogs for LOC101928875 Gene

No data available for Paralogs for LOC101928875 Gene

Variants for LOC101928875 Gene

Sequence variations from dbSNP and Humsavar for LOC101928875 Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000004625 -- 114,172,678(-) G/A non_coding_transcript_variant
rs1000197337 -- 114,161,369(-) G/A intron_variant
rs1000215282 -- 114,160,346(-) C/T non_coding_transcript_variant
rs1000381205 -- 114,167,898(-) C/T intron_variant
rs1000414245 -- 114,167,683(-) C/T intron_variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Additional Variant Information for LOC101928875 Gene

Disorders for LOC101928875 Gene

No disorders were found for LOC101928875 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for LOC101928875 Gene

Publications for LOC101928875 Gene

No publications were found for LOC101928875 Gene.

Products for LOC101928875 Gene

Sources for LOC101928875 Gene

Content
Loading form....